Analysis of interatomic Contacts of Structural Units in PDB entry:
5OL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OL0 entry

There are 6 chains in PDB entry 5OL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 7ASP 360
B
 ALA 7ASP 360
C
 ARG 379LYS 381
C
 LEU 383LYS 386
D
 SER 378LYS 381
D
 LEU 383LYS 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5OL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 11Right-handed 310
Helix 2
AA2
A
18 29Right-handed alpha
Helix 3
AA3
A
40 47Right-handed 310
Helix 4
AA4
A
56 66Right-handed alpha
Helix 5
AA5
A
69 74Right-handed 310
Helix 6
AA6
A
75 82Right-handed alpha
Helix 7
AA7
A
82 94Right-handed alpha
Helix 8
AA8
A
103 115Right-handed alpha
Helix 9
AA9
A
128 133Right-handed alpha
Helix 10
AB1
A
160 170Right-handed alpha
Helix 11
AB2
A
195 205Right-handed alpha
Helix 12
AB3
A
206 209Right-handed 310
Helix 13
AB4
A
223 230Right-handed 310
Helix 14
AB5
A
246 250Right-handed 310
Helix 15
AB6
A
334 346Right-handed alpha
Helix 16
AB7
A
348 358Right-handed alpha
Helix 17
AB8
A
359 360Right-handed 310
Helix 18
AB9
B
7 11Right-handed 310
Helix 19
AC1
B
18 29Right-handed alpha
Helix 20
AC2
B
40 47Right-handed 310
Helix 21
AC3
B
71 74Right-handed 310
Helix 22
AC4
B
75 82Right-handed alpha
Helix 23
AC5
B
82 94Right-handed alpha
Helix 24
AC6
B
103 115Right-handed alpha
Helix 25
AC7
B
128 133Right-handed alpha
Helix 26
AC8
B
160 170Right-handed alpha
Helix 27
AC9
B
195 204Right-handed alpha
Helix 28
AD1
B
205 209Right-handed 310
Helix 29
AD2
B
223 231Right-handed 310
Helix 30
AD3
B
246 250Right-handed 310
Helix 31
AD4
B
334 346Right-handed alpha
Helix 32
AD5
B
348 360Right-handed alpha
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There are 4 sheets in PDB entry 5OL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
A
118 123parallel
Strand 3
A
34 38parallel
Strand 4
A
211 215parallel
Strand 5
A
237 240parallel
Strand 6
A
328 331parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
145 152anti-parallel
Strand 3
A
183 187anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 142first strand
Strand 2
B
118 123parallel
Strand 3
B
34 38parallel
Strand 4
B
211 215parallel
Strand 5
B
237 240parallel
Strand 6
B
328 331parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 159first strand
Strand 2
B
145 152anti-parallel
Strand 3
B
183 187anti-parallel
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