Analysis of interatomic Contacts of Structural Units in PDB entry:
5OLA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5OLA entry

There are 5 chains in PDB entry 5OLA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 146	ASP 357
B	LEU 151	ASP 357
C	PRO 146	ASP 357
D	LEU 151	ASP 357
E	GLN 218	HIS 608

There are131 helices in PDB entry 5OLA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	146	154	Right-handed alpha
Helix 2	AA2	A	160	166	Right-handed alpha
Helix 3	AA3	A	208	221	Right-handed alpha
Helix 4	AA4	A	240	242	Right-handed 310
Helix 5	AA5	A	243	262	Right-handed alpha
Helix 6	AA6	A	264	269	Right-handed alpha
Helix 7	AA7	A	278	285	Right-handed alpha
Helix 8	AA8	A	296	305	Right-handed alpha
Helix 9	AA9	A	318	332	Right-handed alpha
Helix 10	AB1	A	337	355	Right-handed alpha
Helix 11	AB2	B	160	166	Right-handed alpha
Helix 12	AB3	B	208	221	Right-handed alpha
Helix 13	AB4	B	240	242	Right-handed 310
Helix 14	AB5	B	243	262	Right-handed alpha
Helix 15	AB6	B	264	269	Right-handed alpha
Helix 16	AB7	B	278	285	Right-handed alpha
Helix 17	AB8	B	296	306	Right-handed alpha
Helix 18	AB9	B	321	332	Right-handed alpha
Helix 19	AC1	B	337	355	Right-handed alpha
Helix 20	AC2	C	147	154	Right-handed alpha
Helix 21	AC3	C	160	166	Right-handed alpha
Helix 22	AC4	C	208	221	Right-handed alpha
Helix 23	AC5	C	240	242	Right-handed 310
Helix 24	AC6	C	243	262	Right-handed alpha
Helix 25	AC7	C	264	269	Right-handed alpha
Helix 26	AC8	C	278	285	Right-handed alpha
Helix 27	AC9	C	296	305	Right-handed alpha
Helix 28	AD1	C	318	332	Right-handed alpha
Helix 29	AD2	C	337	355	Right-handed alpha
Helix 30	AD3	D	160	166	Right-handed alpha
Helix 31	AD4	D	208	221	Right-handed alpha
Helix 32	AD5	D	240	242	Right-handed 310
Helix 33	AD6	D	243	262	Right-handed alpha
Helix 34	AD7	D	264	269	Right-handed alpha
Helix 35	AD8	D	278	285	Right-handed alpha
Helix 36	AD9	D	296	305	Right-handed alpha
Helix 37	AE1	D	318	332	Right-handed alpha
Helix 38	AE2	D	337	355	Right-handed alpha
Helix 39	AE3	E	220	237	Right-handed alpha
Helix 40	AE4	E	238	252	Right-handed alpha
Helix 41	AE5	E	252	257	Right-handed alpha
Helix 42	AE6	E	260	275	Right-handed alpha
Helix 43	AE7	E	276	289	Right-handed alpha
Helix 44	AE8	E	295	310	Right-handed alpha
Helix 45	AE9	E	312	327	Right-handed alpha
Helix 46	AF1	E	330	337	Right-handed alpha
Helix 47	AF2	E	340	355	Right-handed alpha
Helix 48	AF3	E	374	379	Right-handed alpha
Helix 49	AF4	E	392	410	Right-handed alpha
Helix 50	AF5	E	425	462	Right-handed alpha
Helix 51	AF6	E	467	472	Right-handed alpha
Helix 52	AF7	E	476	489	Right-handed alpha
Helix 53	AF8	E	497	520	Right-handed alpha
Helix 54	AF9	E	521	538	Right-handed alpha
Helix 55	AG1	E	548	557	Right-handed alpha
Helix 56	AG2	E	568	587	Right-handed alpha
Helix 57	AG3	E	624	635	Right-handed alpha
Helix 58	AG4	E	678	687	Right-handed alpha
Helix 59	AG5	E	688	704	Right-handed alpha
Helix 60	AG6	E	710	723	Right-handed alpha
Helix 61	AG7	E	726	730	Right-handed 310
Helix 62	AG8	E	734	738	Right-handed 310
Helix 63	AG9	E	751	789	Right-handed alpha
Helix 64	AH1	E	818	824	Right-handed alpha
Helix 65	AH2	E	836	850	Right-handed alpha
Helix 66	AH3	E	856	867	Right-handed alpha
Helix 67	AH4	E	867	877	Right-handed alpha
Helix 68	AH5	E	884	888	Right-handed 310
Helix 69	AH6	E	890	906	Right-handed alpha
Helix 70	AH7	E	909	912	Right-handed 310
Helix 71	AH8	E	925	936	Right-handed alpha
Helix 72	AH9	E	937	944	Right-handed alpha
Helix 73	AI1	E	954	974	Right-handed alpha
Helix 74	AI2	E	975	981	Right-handed alpha
Helix 75	AI3	E	986	998	Right-handed alpha
Helix 76	AI4	E	1002	1016	Right-handed alpha
Helix 77	AI5	E	1024	1044	Right-handed alpha
Helix 78	AI6	E	1044	1064	Right-handed alpha
Helix 79	AI7	E	1111	1141	Right-handed alpha
Helix 80	AI8	E	1156	1158	Right-handed 310
Helix 81	AI9	E	1159	1176	Right-handed alpha
Helix 82	AJ1	E	1178	1192	Right-handed alpha
Helix 83	AJ2	E	1198	1209	Right-handed alpha
Helix 84	AJ3	E	1218	1225	Right-handed 310
Helix 85	AJ4	F	220	237	Right-handed alpha
Helix 86	AJ5	F	238	252	Right-handed alpha
Helix 87	AJ6	F	252	257	Right-handed alpha
Helix 88	AJ7	F	260	275	Right-handed alpha
Helix 89	AJ8	F	276	289	Right-handed alpha
Helix 90	AJ9	F	295	310	Right-handed alpha
Helix 91	AK1	F	312	327	Right-handed alpha
Helix 92	AK2	F	329	337	Right-handed alpha
Helix 93	AK3	F	340	355	Right-handed alpha
Helix 94	AK4	F	374	379	Right-handed alpha
Helix 95	AK5	F	392	410	Right-handed alpha
Helix 96	AK6	F	425	462	Right-handed alpha
Helix 97	AK7	F	467	472	Right-handed alpha
Helix 98	AK8	F	476	489	Right-handed alpha
Helix 99	AK9	F	497	520	Right-handed alpha
Helix 100	AL1	F	521	538	Right-handed alpha
Helix 101	AL2	F	548	557	Right-handed alpha
Helix 102	AL3	F	568	587	Right-handed alpha
Helix 103	AL4	F	624	635	Right-handed alpha
Helix 104	AL5	F	677	687	Right-handed alpha
Helix 105	AL6	F	688	704	Right-handed alpha
Helix 106	AL7	F	710	723	Right-handed alpha
Helix 107	AL8	F	726	730	Right-handed 310
Helix 108	AL9	F	734	738	Right-handed 310
Helix 109	AM1	F	751	789	Right-handed alpha
Helix 110	AM2	F	818	824	Right-handed alpha
Helix 111	AM3	F	836	850	Right-handed alpha
Helix 112	AM4	F	856	867	Right-handed alpha
Helix 113	AM5	F	867	877	Right-handed alpha
Helix 114	AM6	F	884	888	Right-handed 310
Helix 115	AM7	F	890	906	Right-handed alpha
Helix 116	AM8	F	909	912	Right-handed 310
Helix 117	AM9	F	925	936	Right-handed alpha
Helix 118	AN1	F	937	944	Right-handed alpha
Helix 119	AN2	F	954	974	Right-handed alpha
Helix 120	AN3	F	975	981	Right-handed alpha
Helix 121	AN4	F	986	997	Right-handed alpha
Helix 122	AN5	F	998	1000	Right-handed 310
Helix 123	AN6	F	1002	1016	Right-handed alpha
Helix 124	AN7	F	1024	1044	Right-handed alpha
Helix 125	AN8	F	1044	1064	Right-handed alpha
Helix 126	AN9	F	1111	1142	Right-handed alpha
Helix 127	AO1	F	1156	1158	Right-handed 310
Helix 128	AO2	F	1159	1176	Right-handed alpha
Helix 129	AO3	F	1178	1192	Right-handed alpha
Helix 130	AO4	F	1197	1209	Right-handed alpha
Helix 131	AO5	F	1218	1225	Right-handed 310

There are 28 sheets in PDB entry 5OLA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	156	first strand
Strand 2	A	273	277	anti-parallel
Strand 3	A	228	233	parallel
Strand 4	A	169	175	parallel
Strand 5	A	180	186	anti-parallel
Strand 6	A	191	196	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	288	289	first strand
Strand 2	A	292	293	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	155	156	first strand
Strand 2	B	273	277	anti-parallel
Strand 3	B	228	233	parallel
Strand 4	B	169	175	parallel
Strand 5	B	180	186	anti-parallel
Strand 6	B	191	197	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	156	first strand
Strand 2	C	273	277	anti-parallel
Strand 3	C	228	233	parallel
Strand 4	C	169	175	parallel
Strand 5	C	180	186	anti-parallel
Strand 6	C	191	196	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	289	first strand
Strand 2	C	292	293	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	155	156	first strand
Strand 2	D	273	277	anti-parallel
Strand 3	D	228	233	parallel
Strand 4	D	169	175	parallel
Strand 5	D	180	186	anti-parallel
Strand 6	D	191	196	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	411	415	first strand
Strand 2	E	638	642	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	495	496	first strand
Strand 2	E	620	623	anti-parallel
Strand 3	E	606	608	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	588	590	first strand
Strand 2	E	602	604	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	611	612	first strand
Strand 2	E	617	618	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	653	657	first strand
Strand 2	E	660	662	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	794	795	first strand
Strand 2	E	706	709	anti-parallel
Strand 3	E	825	827	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	798	800	first strand
Strand 2	E	806	808	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	831	832	first strand
Strand 2	E	914	915	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1147	1149	first strand
Strand 2	E	1152	1155	anti-parallel
Strand 3	E	919	923	anti-parallel
Strand 4	E	1229	1230	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1069	1071	first strand
Strand 2	E	1077	1079	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1083	1084	first strand
Strand 2	E	1109	1110	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	411	415	first strand
Strand 2	F	638	642	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	495	496	first strand
Strand 2	F	620	623	anti-parallel
Strand 3	F	606	608	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	588	590	first strand
Strand 2	F	602	604	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	611	612	first strand
Strand 2	F	617	618	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	653	657	first strand
Strand 2	F	660	662	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	794	795	first strand
Strand 2	F	706	709	anti-parallel
Strand 3	F	825	827	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	798	800	first strand
Strand 2	F	806	808	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	831	832	first strand
Strand 2	F	914	915	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1147	1149	first strand
Strand 2	F	1152	1155	anti-parallel
Strand 3	F	919	923	anti-parallel
Strand 4	F	1229	1230	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1069	1071	first strand
Strand 2	F	1077	1079	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1083	1084	first strand
Strand 2	F	1109	1110	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5OLA

Analysis of interatomic Contacts of Structural Units in PDB entry:
5OLA