Analysis of interatomic Contacts of Structural Units in PDB entry:
5OLC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5OLC entry

There are 8 chains in PDB entry 5OLC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	LYS 376
B	SER 1	LYS 376
C	SER 1	LYS 376
D	SER 1	LYS 376
E	SER 1	LYS 376
F	SER 1	LYS 376
G	SER 1	LYS 376
H	SER 1	LYS 376

There are125 helices in PDB entry 5OLC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	63	Right-handed alpha
Helix 2	AA2	A	64	66	Right-handed 310
Helix 3	AA3	A	73	86	Right-handed alpha
Helix 4	AA4	A	87	89	Right-handed 310
Helix 5	AA5	A	92	113	Right-handed alpha
Helix 6	AA6	A	116	121	Right-handed alpha
Helix 7	AA7	A	145	158	Right-handed alpha
Helix 8	AA8	A	170	186	Right-handed alpha
Helix 9	AA9	A	200	212	Right-handed alpha
Helix 10	AB1	A	227	238	Right-handed alpha
Helix 11	AB2	A	249	260	Right-handed alpha
Helix 12	AB3	A	269	274	Right-handed alpha
Helix 13	AB4	A	274	289	Right-handed alpha
Helix 14	AB5	A	300	314	Right-handed alpha
Helix 15	AB6	A	335	340	Right-handed alpha
Helix 16	AB7	A	366	374	Right-handed alpha
Helix 17	AB8	B	51	63	Right-handed alpha
Helix 18	AB9	B	64	66	Right-handed 310
Helix 19	AC1	B	73	86	Right-handed alpha
Helix 20	AC2	B	92	113	Right-handed alpha
Helix 21	AC3	B	116	121	Right-handed alpha
Helix 22	AC4	B	145	158	Right-handed alpha
Helix 23	AC5	B	170	186	Right-handed alpha
Helix 24	AC6	B	200	212	Right-handed alpha
Helix 25	AC7	B	227	238	Right-handed alpha
Helix 26	AC8	B	250	260	Right-handed alpha
Helix 27	AC9	B	269	274	Right-handed alpha
Helix 28	AD1	B	274	289	Right-handed alpha
Helix 29	AD2	B	300	314	Right-handed alpha
Helix 30	AD3	B	335	340	Right-handed alpha
Helix 31	AD4	B	366	374	Right-handed alpha
Helix 32	AD5	C	51	63	Right-handed alpha
Helix 33	AD6	C	64	66	Right-handed 310
Helix 34	AD7	C	73	86	Right-handed alpha
Helix 35	AD8	C	87	89	Right-handed 310
Helix 36	AD9	C	92	113	Right-handed alpha
Helix 37	AE1	C	116	121	Right-handed alpha
Helix 38	AE2	C	145	158	Right-handed alpha
Helix 39	AE3	C	170	186	Right-handed alpha
Helix 40	AE4	C	200	212	Right-handed alpha
Helix 41	AE5	C	227	238	Right-handed alpha
Helix 42	AE6	C	250	260	Right-handed alpha
Helix 43	AE7	C	269	274	Right-handed alpha
Helix 44	AE8	C	274	289	Right-handed alpha
Helix 45	AE9	C	300	314	Right-handed alpha
Helix 46	AF1	C	335	341	Right-handed alpha
Helix 47	AF2	C	366	374	Right-handed alpha
Helix 48	AF3	D	51	63	Right-handed alpha
Helix 49	AF4	D	64	66	Right-handed 310
Helix 50	AF5	D	73	86	Right-handed alpha
Helix 51	AF6	D	92	113	Right-handed alpha
Helix 52	AF7	D	116	121	Right-handed alpha
Helix 53	AF8	D	145	158	Right-handed alpha
Helix 54	AF9	D	170	186	Right-handed alpha
Helix 55	AG1	D	200	212	Right-handed alpha
Helix 56	AG2	D	227	238	Right-handed alpha
Helix 57	AG3	D	249	260	Right-handed alpha
Helix 58	AG4	D	269	274	Right-handed alpha
Helix 59	AG5	D	274	289	Right-handed alpha
Helix 60	AG6	D	300	314	Right-handed alpha
Helix 61	AG7	D	335	341	Right-handed alpha
Helix 62	AG8	D	366	374	Right-handed alpha
Helix 63	AG9	E	51	63	Right-handed alpha
Helix 64	AH1	E	64	66	Right-handed 310
Helix 65	AH2	E	73	86	Right-handed alpha
Helix 66	AH3	E	87	89	Right-handed 310
Helix 67	AH4	E	92	113	Right-handed alpha
Helix 68	AH5	E	116	121	Right-handed alpha
Helix 69	AH6	E	145	158	Right-handed alpha
Helix 70	AH7	E	170	186	Right-handed alpha
Helix 71	AH8	E	200	212	Right-handed alpha
Helix 72	AH9	E	227	238	Right-handed alpha
Helix 73	AI1	E	249	260	Right-handed alpha
Helix 74	AI2	E	269	274	Right-handed alpha
Helix 75	AI3	E	274	289	Right-handed alpha
Helix 76	AI4	E	300	314	Right-handed alpha
Helix 77	AI5	E	335	340	Right-handed alpha
Helix 78	AI6	E	366	374	Right-handed alpha
Helix 79	AI7	F	51	63	Right-handed alpha
Helix 80	AI8	F	64	66	Right-handed 310
Helix 81	AI9	F	73	86	Right-handed alpha
Helix 82	AJ1	F	87	89	Right-handed 310
Helix 83	AJ2	F	92	113	Right-handed alpha
Helix 84	AJ3	F	116	121	Right-handed alpha
Helix 85	AJ4	F	145	158	Right-handed alpha
Helix 86	AJ5	F	170	186	Right-handed alpha
Helix 87	AJ6	F	200	212	Right-handed alpha
Helix 88	AJ7	F	227	238	Right-handed alpha
Helix 89	AJ8	F	249	259	Right-handed alpha
Helix 90	AJ9	F	269	274	Right-handed alpha
Helix 91	AK1	F	274	289	Right-handed alpha
Helix 92	AK2	F	300	314	Right-handed alpha
Helix 93	AK3	F	335	340	Right-handed alpha
Helix 94	AK4	F	366	374	Right-handed alpha
Helix 95	AK5	G	51	63	Right-handed alpha
Helix 96	AK6	G	64	66	Right-handed 310
Helix 97	AK7	G	73	86	Right-handed alpha
Helix 98	AK8	G	92	113	Right-handed alpha
Helix 99	AK9	G	116	121	Right-handed alpha
Helix 100	AL1	G	145	158	Right-handed alpha
Helix 101	AL2	G	170	186	Right-handed alpha
Helix 102	AL3	G	200	212	Right-handed alpha
Helix 103	AL4	G	227	238	Right-handed alpha
Helix 104	AL5	G	249	259	Right-handed alpha
Helix 105	AL6	G	269	274	Right-handed alpha
Helix 106	AL7	G	274	289	Right-handed alpha
Helix 107	AL8	G	300	314	Right-handed alpha
Helix 108	AL9	G	335	340	Right-handed alpha
Helix 109	AM1	G	366	373	Right-handed alpha
Helix 110	AM2	H	51	63	Right-handed alpha
Helix 111	AM3	H	64	66	Right-handed 310
Helix 112	AM4	H	73	86	Right-handed alpha
Helix 113	AM5	H	87	89	Right-handed 310
Helix 114	AM6	H	92	113	Right-handed alpha
Helix 115	AM7	H	116	121	Right-handed alpha
Helix 116	AM8	H	145	158	Right-handed alpha
Helix 117	AM9	H	170	186	Right-handed alpha
Helix 118	AN1	H	200	212	Right-handed alpha
Helix 119	AN2	H	227	238	Right-handed alpha
Helix 120	AN3	H	249	260	Right-handed alpha
Helix 121	AN4	H	269	274	Right-handed alpha
Helix 122	AN5	H	274	289	Right-handed alpha
Helix 123	AN6	H	300	314	Right-handed alpha
Helix 124	AN7	H	335	340	Right-handed alpha
Helix 125	AN8	H	366	374	Right-handed alpha

There are 32 sheets in PDB entry 5OLC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	14	first strand
Strand 2	A	28	38	anti-parallel
Strand 3	A	43	48	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	129	first strand
Strand 2	A	352	354	anti-parallel
Strand 3	A	347	349	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	292	293	first strand
Strand 2	A	265	266	parallel
Strand 3	A	242	244	parallel
Strand 4	A	216	220	parallel
Strand 5	A	190	194	parallel
Strand 6	A	162	166	parallel
Strand 7	A	132	134	parallel
Strand 8	A	329	331	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	344	first strand
Strand 2	A	363	365	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	14	first strand
Strand 2	B	28	38	anti-parallel
Strand 3	B	43	48	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	129	first strand
Strand 2	B	353	354	anti-parallel
Strand 3	B	347	348	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	292	293	first strand
Strand 2	B	265	266	parallel
Strand 3	B	242	244	parallel
Strand 4	B	216	220	parallel
Strand 5	B	190	194	parallel
Strand 6	B	162	166	parallel
Strand 7	B	132	134	parallel
Strand 8	B	329	331	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	344	first strand
Strand 2	B	363	365	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	14	first strand
Strand 2	C	28	38	anti-parallel
Strand 3	C	43	48	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	129	first strand
Strand 2	C	352	354	anti-parallel
Strand 3	C	347	349	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	292	293	first strand
Strand 2	C	265	266	parallel
Strand 3	C	242	244	parallel
Strand 4	C	216	220	parallel
Strand 5	C	190	194	parallel
Strand 6	C	162	166	parallel
Strand 7	C	132	134	parallel
Strand 8	C	329	331	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	344	first strand
Strand 2	C	363	365	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	11	first strand
Strand 2	D	31	38	anti-parallel
Strand 3	D	43	48	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	129	first strand
Strand 2	D	352	354	anti-parallel
Strand 3	D	347	349	anti-parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	292	293	first strand
Strand 2	D	265	266	parallel
Strand 3	D	242	244	parallel
Strand 4	D	216	220	parallel
Strand 5	D	190	194	parallel
Strand 6	D	162	166	parallel
Strand 7	D	132	134	parallel
Strand 8	D	329	331	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	342	344	first strand
Strand 2	D	363	365	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	14	first strand
Strand 2	E	28	38	anti-parallel
Strand 3	E	43	48	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	128	129	first strand
Strand 2	E	352	354	anti-parallel
Strand 3	E	347	349	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	292	293	first strand
Strand 2	E	265	266	parallel
Strand 3	E	242	244	parallel
Strand 4	E	216	220	parallel
Strand 5	E	190	194	parallel
Strand 6	E	162	166	parallel
Strand 7	E	132	134	parallel
Strand 8	E	329	331	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	342	344	first strand
Strand 2	E	363	365	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	14	first strand
Strand 2	F	28	38	anti-parallel
Strand 3	F	43	48	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	128	129	first strand
Strand 2	F	352	354	anti-parallel
Strand 3	F	347	349	anti-parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	292	293	first strand
Strand 2	F	265	266	parallel
Strand 3	F	242	244	parallel
Strand 4	F	216	220	parallel
Strand 5	F	190	194	parallel
Strand 6	F	162	166	parallel
Strand 7	F	132	134	parallel
Strand 8	F	329	331	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	342	344	first strand
Strand 2	F	363	365	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	11	first strand
Strand 2	G	31	38	anti-parallel
Strand 3	G	43	48	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	128	129	first strand
Strand 2	G	352	354	anti-parallel
Strand 3	G	347	349	anti-parallel

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There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	292	293	first strand
Strand 2	G	265	266	parallel
Strand 3	G	242	244	parallel
Strand 4	G	216	220	parallel
Strand 5	G	190	194	parallel
Strand 6	G	162	166	parallel
Strand 7	G	132	135	parallel
Strand 8	G	329	331	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	342	344	first strand
Strand 2	G	363	365	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	11	first strand
Strand 2	H	31	38	anti-parallel
Strand 3	H	43	48	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	128	129	first strand
Strand 2	H	352	354	anti-parallel
Strand 3	H	347	349	anti-parallel

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There are 8 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	292	293	first strand
Strand 2	H	265	266	parallel
Strand 3	H	242	244	parallel
Strand 4	H	216	220	parallel
Strand 5	H	190	194	parallel
Strand 6	H	162	166	parallel
Strand 7	H	132	135	parallel
Strand 8	H	329	331	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	342	344	first strand
Strand 2	H	363	365	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5OLC

Analysis of interatomic Contacts of Structural Units in PDB entry:
5OLC