Analysis of interatomic Contacts of Structural Units in PDB entry:
5OLJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OLJ entry

There is 1 chain in PDB entry 5OLJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 21LEU 723
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5OLJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 33Right-handed alpha
Helix 2
AA2
A
190 198Right-handed alpha
Helix 3
AA3
A
327 333Right-handed alpha
Helix 4
AA4
A
460 470Right-handed alpha
Helix 5
AA5
A
527 533Right-handed alpha
Helix 6
AA6
A
550 556Right-handed alpha
Helix 7
AA7
A
562 577Right-handed alpha
Helix 8
AA8
A
593 606Right-handed alpha
Helix 9
AA9
A
621 625Right-handed 310
Helix 10
AB1
A
626 635Right-handed alpha
Helix 11
AB2
A
640 647Right-handed alpha
Helix 12
AB3
A
649 656Right-handed 310
Helix 13
AB4
A
672 686Right-handed alpha
Helix 14
AB5
A
706 723Right-handed alpha
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There are 11 sheets in PDB entry 5OLJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
53 57anti-parallel
Strand 3
A
63 68anti-parallel
Strand 4
A
74 80anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
103 112anti-parallel
Strand 3
A
118 126anti-parallel
Strand 4
A
131 134anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
153 158anti-parallel
Strand 3
A
161 166anti-parallel
Strand 4
A
171 174anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 186first strand
Strand 2
A
211 218anti-parallel
Strand 3
A
203 205anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 186first strand
Strand 2
A
211 218anti-parallel
Strand 3
A
252 259anti-parallel
Strand 4
A
264 268anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 229first strand
Strand 2
A
237 242anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 283first strand
Strand 2
A
290 295anti-parallel
Strand 3
A
301 307anti-parallel
Strand 4
A
314 321anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 336first strand
Strand 2
A
342 346anti-parallel
Strand 3
A
353 357anti-parallel
Strand 4
A
363 366anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 380first strand
Strand 2
A
386 390anti-parallel
Strand 3
A
399 403anti-parallel
Strand 4
A
409 411anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 423first strand
Strand 2
A
429 435anti-parallel
Strand 3
A
442 447anti-parallel
Strand 4
A
452 458anti-parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 481first strand
Strand 2
A
487 493anti-parallel
Strand 3
A
537 541anti-parallel
Strand 4
A
504 509parallel
Strand 5
A
582 592parallel
Strand 6
A
612 616parallel
Strand 7
A
659 665parallel
Strand 8
A
691 695parallel
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