Analysis of interatomic Contacts of Structural Units in PDB entry:
5OLN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OLN entry

There are 2 chains in PDB entry 5OLN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 433
B
 ALA 0GLU 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5OLN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
17 30Right-handed alpha
Helix 3
AA3
A
34 49Right-handed alpha
Helix 4
AA4
A
51 64Right-handed alpha
Helix 5
AA5
A
90 101Right-handed alpha
Helix 6
AA6
A
119 126Right-handed alpha
Helix 7
AA7
A
135 147Right-handed alpha
Helix 8
AA8
A
158 170Right-handed alpha
Helix 9
AA9
A
176 191Right-handed alpha
Helix 10
AB1
A
210 228Right-handed alpha
Helix 11
AB2
A
249 261Right-handed alpha
Helix 12
AB3
A
265 283Right-handed alpha
Helix 13
AB4
A
288 302Right-handed alpha
Helix 14
AB5
A
303 316Right-handed alpha
Helix 15
AB6
A
319 324Right-handed 310
Helix 16
AB7
A
325 329Right-handed 310
Helix 17
AB8
A
350 361Right-handed alpha
Helix 18
AB9
A
404 414Right-handed alpha
Helix 19
AC1
B
1 12Right-handed alpha
Helix 20
AC2
B
17 30Right-handed alpha
Helix 21
AC3
B
34 49Right-handed alpha
Helix 22
AC4
B
51 64Right-handed alpha
Helix 23
AC5
B
90 101Right-handed alpha
Helix 24
AC6
B
119 125Right-handed alpha
Helix 25
AC7
B
135 147Right-handed alpha
Helix 26
AC8
B
158 170Right-handed alpha
Helix 27
AC9
B
176 191Right-handed alpha
Helix 28
AD1
B
210 228Right-handed alpha
Helix 29
AD2
B
249 261Right-handed alpha
Helix 30
AD3
B
265 283Right-handed alpha
Helix 31
AD4
B
288 302Right-handed alpha
Helix 32
AD5
B
303 316Right-handed alpha
Helix 33
AD6
B
319 323Right-handed 310
Helix 34
AD7
B
325 329Right-handed 310
Helix 35
AD8
B
350 362Right-handed alpha
Helix 36
AD9
B
404 414Right-handed alpha
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There are 8 sheets in PDB entry 5OLN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 83first strand
Strand 2
A
195 202parallel
Strand 3
A
232 238parallel
Strand 4
A
427 431anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
148 152parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 248first strand
Strand 2
A
377 380anti-parallel
Strand 3
A
393 399anti-parallel
Strand 4
A
334 339anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
344 349anti-parallel
Strand 3
A
415 418anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 83first strand
Strand 2
B
195 202parallel
Strand 3
B
232 238parallel
Strand 4
B
427 431anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 110first strand
Strand 2
B
148 152parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 248first strand
Strand 2
B
377 380anti-parallel
Strand 3
B
393 399anti-parallel
Strand 4
B
334 339anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 388first strand
Strand 2
B
344 349anti-parallel
Strand 3
B
415 418anti-parallel
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