Analysis of interatomic Contacts of Structural Units in PDB entry:
5OLP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OLP entry

There are 2 chains in PDB entry 5OLP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 20LYS 451
B
 GLN 20LYS 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5OLP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 51Right-handed 310
Helix 2
AA2
A
60 74Right-handed alpha
Helix 3
AA3
A
112 117Right-handed 310
Helix 4
AA4
A
156 162Right-handed alpha
Helix 5
AA5
A
166 182Right-handed alpha
Helix 6
AA6
A
185 189Right-handed 310
Helix 7
AA7
A
279 287Right-handed alpha
Helix 8
AA8
B
48 51Right-handed 310
Helix 9
AA9
B
60 74Right-handed alpha
Helix 10
AB1
B
112 117Right-handed 310
Helix 11
AB2
B
156 162Right-handed alpha
Helix 12
AB3
B
166 182Right-handed alpha
Helix 13
AB4
B
185 189Right-handed 310
Helix 14
AB5
B
280 287Right-handed alpha
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There are 10 sheets in PDB entry 5OLP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 24first strand
Strand 2
A
35 38anti-parallel
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There are 16 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
77 81parallel
Strand 3
A
97 101parallel
Strand 4
A
142 147parallel
Strand 5
A
209 214parallel
Strand 6
A
232 237parallel
Strand 7
A
257 262parallel
Strand 8
A
290 296parallel
Strand 9
A
317 338parallel
Strand 10
A
305 309parallel
Strand 11
A
273 276parallel
Strand 12
A
251 254parallel
Strand 13
A
226 229parallel
Strand 14
A
203 206parallel
Strand 15
A
136 139parallel
Strand 16
A
91 92parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
77 81parallel
Strand 3
A
97 101parallel
Strand 4
A
142 147parallel
Strand 5
A
209 214parallel
Strand 6
A
232 237parallel
Strand 7
A
257 262parallel
Strand 8
A
290 296parallel
Strand 9
A
317 338parallel
Strand 10
A
346 367parallel
Strand 11
A
387 408parallel
Strand 12
A
415 436parallel
Strand 13
A
438 450parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 88first strand
Strand 2
A
105 109parallel
Strand 3
A
151 154parallel
Strand 4
A
217 219parallel
Strand 5
A
240 243parallel
Strand 6
A
265 268parallel
Strand 7
A
299 302parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 124first strand
Strand 2
A
127 131anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 24first strand
Strand 2
B
35 38anti-parallel
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There are 16 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 46first strand
Strand 2
B
77 81parallel
Strand 3
B
97 101parallel
Strand 4
B
142 147parallel
Strand 5
B
209 214parallel
Strand 6
B
232 237parallel
Strand 7
B
257 262parallel
Strand 8
B
290 296parallel
Strand 9
B
317 338parallel
Strand 10
B
305 309parallel
Strand 11
B
273 276parallel
Strand 12
B
251 254parallel
Strand 13
B
226 229parallel
Strand 14
B
203 206parallel
Strand 15
B
136 139parallel
Strand 16
B
91 92parallel
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There are 13 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 46first strand
Strand 2
B
77 81parallel
Strand 3
B
97 101parallel
Strand 4
B
142 147parallel
Strand 5
B
209 214parallel
Strand 6
B
232 237parallel
Strand 7
B
257 262parallel
Strand 8
B
290 296parallel
Strand 9
B
317 338parallel
Strand 10
B
346 367parallel
Strand 11
B
387 408parallel
Strand 12
B
415 436parallel
Strand 13
B
438 450parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 88first strand
Strand 2
B
105 109parallel
Strand 3
B
151 154parallel
Strand 4
B
217 219parallel
Strand 5
B
240 243parallel
Strand 6
B
265 268parallel
Strand 7
B
299 302parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 124first strand
Strand 2
B
127 131anti-parallel
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