Analysis of interatomic Contacts of Structural Units in PDB entry:
5OLR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OLR entry

There are 3 chains in PDB entry 5OLR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 24PHE 448
B
 LYS 24PHE 448
C
 LYS 24TRP 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5OLR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 54Right-handed alpha
Helix 2
AA2
A
205 210Right-handed 310
Helix 3
AA3
A
222 226Right-handed 310
Helix 4
AA4
A
395 399Right-handed 310
Helix 5
AA5
A
404 408Right-handed 310
Helix 6
AA6
A
412 418Right-handed 310
Helix 7
AA7
A
435 442Right-handed alpha
Helix 8
AA8
B
46 54Right-handed alpha
Helix 9
AA9
B
222 226Right-handed 310
Helix 10
AB1
B
395 399Right-handed 310
Helix 11
AB2
B
404 408Right-handed 310
Helix 12
AB3
B
412 418Right-handed 310
Helix 13
AB4
B
435 442Right-handed alpha
Helix 14
AB5
C
46 54Right-handed alpha
Helix 15
AB6
C
206 210Right-handed 310
Helix 16
AB7
C
222 226Right-handed 310
Helix 17
AB8
C
395 399Right-handed 310
Helix 18
AB9
C
404 408Right-handed 310
Helix 19
AC1
C
412 418Right-handed 310
Helix 20
AC2
C
435 442Right-handed alpha
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There are 12 sheets in PDB entry 5OLR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
59 62parallel
Strand 3
A
100 104parallel
Strand 4
A
136 139parallel
Strand 5
A
166 171parallel
Strand 6
A
189 194parallel
Strand 7
A
235 237parallel
Strand 8
A
259 261parallel
Strand 9
A
307 309parallel
Strand 10
A
331 333parallel
Strand 11
A
366 368parallel
Strand 12
A
391 393parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
112 115parallel
Strand 3
A
142 144parallel
Strand 4
A
174 178parallel
Strand 5
A
197 201parallel
Strand 6
A
240 244parallel
Strand 7
A
264 266parallel
Strand 8
A
312 314parallel
Strand 9
A
336 338parallel
Strand 10
A
371 373parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
84 90anti-parallel
Strand 3
A
125 131parallel
Strand 4
A
157 161parallel
Strand 5
A
181 185parallel
Strand 6
A
217 219parallel
Strand 7
A
249 250parallel
Strand 8
A
282 285parallel
Strand 9
A
319 322parallel
Strand 10
A
342 345parallel
Strand 11
A
380 383parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 349first strand
Strand 2
A
359 360anti-parallel
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There are 12 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 28first strand
Strand 2
B
59 62parallel
Strand 3
B
100 104parallel
Strand 4
B
136 139parallel
Strand 5
B
166 171parallel
Strand 6
B
189 194parallel
Strand 7
B
235 237parallel
Strand 8
B
259 261parallel
Strand 9
B
307 309parallel
Strand 10
B
331 333parallel
Strand 11
B
366 368parallel
Strand 12
B
391 393parallel
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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
112 115parallel
Strand 3
B
142 144parallel
Strand 4
B
174 178parallel
Strand 5
B
197 201parallel
Strand 6
B
240 244parallel
Strand 7
B
264 266parallel
Strand 8
B
312 314parallel
Strand 9
B
336 338parallel
Strand 10
B
371 373parallel
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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 79first strand
Strand 2
B
84 90anti-parallel
Strand 3
B
125 131parallel
Strand 4
B
157 161parallel
Strand 5
B
181 185parallel
Strand 6
B
217 219parallel
Strand 7
B
249 250parallel
Strand 8
B
282 285parallel
Strand 9
B
319 322parallel
Strand 10
B
342 345parallel
Strand 11
B
380 383parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 349first strand
Strand 2
B
359 360anti-parallel
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There are 12 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 28first strand
Strand 2
C
59 62parallel
Strand 3
C
100 104parallel
Strand 4
C
136 139parallel
Strand 5
C
169 171parallel
Strand 6
C
192 194parallel
Strand 7
C
235 237parallel
Strand 8
C
259 261parallel
Strand 9
C
307 309parallel
Strand 10
C
331 333parallel
Strand 11
C
366 368parallel
Strand 12
C
391 393parallel
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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 68first strand
Strand 2
C
112 115parallel
Strand 3
C
142 144parallel
Strand 4
C
174 178parallel
Strand 5
C
197 201parallel
Strand 6
C
240 244parallel
Strand 7
C
264 266parallel
Strand 8
C
312 314parallel
Strand 9
C
336 338parallel
Strand 10
C
371 373parallel
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There are 11 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 79first strand
Strand 2
C
84 90anti-parallel
Strand 3
C
125 131parallel
Strand 4
C
157 161parallel
Strand 5
C
181 185parallel
Strand 6
C
217 219parallel
Strand 7
C
249 250parallel
Strand 8
C
282 285parallel
Strand 9
C
319 322parallel
Strand 10
C
342 345parallel
Strand 11
C
380 383parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
348 349first strand
Strand 2
C
359 360anti-parallel
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