Analysis of interatomic Contacts of Structural Units in PDB entry:
5OQQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OQQ entry

There are 4 chains in PDB entry 5OQQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 8SER 911
B
 ASP 8SER 911
D
 SER 384HIS 525
C
 VAL 458SER 521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 5OQQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 25Right-handed alpha
Helix 2
AA2
A
30 48Right-handed alpha
Helix 3
AA3
A
50 64Right-handed alpha
Helix 4
AA4
A
72 99Right-handed alpha
Helix 5
AA5
A
106 124Right-handed alpha
Helix 6
AA6
A
130 145Right-handed alpha
Helix 7
AA7
A
146 148Right-handed 310
Helix 8
AA8
A
152 167Right-handed alpha
Helix 9
AA9
A
171 184Right-handed alpha
Helix 10
AB1
A
206 217Right-handed alpha
Helix 11
AB2
A
219 230Right-handed alpha
Helix 12
AB3
A
236 242Right-handed alpha
Helix 13
AB4
A
243 246Right-handed 310
Helix 14
AB5
A
248 258Right-handed alpha
Helix 15
AB6
A
258 264Right-handed alpha
Helix 16
AB7
A
265 269Right-handed 310
Helix 17
AB8
A
272 286Right-handed alpha
Helix 18
AB9
A
288 301Right-handed alpha
Helix 19
AC1
A
301 307Right-handed alpha
Helix 20
AC2
A
310 319Right-handed alpha
Helix 21
AC3
A
320 324Right-handed 310
Helix 22
AC4
A
325 337Right-handed alpha
Helix 23
AC5
A
337 342Right-handed alpha
Helix 24
AC6
A
347 354Right-handed 310
Helix 25
AC7
A
355 372Right-handed alpha
Helix 26
AC8
A
374 379Right-handed 310
Helix 27
AC9
A
384 401Right-handed alpha
Helix 28
AD1
A
415 431Right-handed alpha
Helix 29
AD2
A
436 452Right-handed alpha
Helix 30
AD3
A
457 472Right-handed alpha
Helix 31
AD4
A
474 498Right-handed alpha
Helix 32
AD5
A
571 587Right-handed alpha
Helix 33
AD6
A
592 595Right-handed 310
Helix 34
AD7
A
596 606Right-handed alpha
Helix 35
AD8
A
606 613Right-handed alpha
Helix 36
AD9
A
615 631Right-handed alpha
Helix 37
AE1
A
633 640Right-handed alpha
Helix 38
AE2
A
640 650Right-handed alpha
Helix 39
AE3
A
652 671Right-handed alpha
Helix 40
AE4
A
672 675Right-handed 310
Helix 41
AE5
A
682 695Right-handed alpha
Helix 42
AE6
A
699 716Right-handed alpha
Helix 43
AE7
A
721 734Right-handed alpha
Helix 44
AE8
A
735 739Right-handed 310
Helix 45
AE9
A
740 758Right-handed alpha
Helix 46
AF1
A
758 783Right-handed alpha
Helix 47
AF2
A
798 810Right-handed alpha
Helix 48
AF3
A
811 815Right-handed 310
Helix 49
AF4
A
826 839Right-handed alpha
Helix 50
AF5
A
844 854Right-handed alpha
Helix 51
AF6
A
865 879Right-handed alpha
Helix 52
AF7
A
888 911Right-handed alpha
Helix 53
AF8
B
9 25Right-handed alpha
Helix 54
AF9
B
30 48Right-handed alpha
Helix 55
AG1
B
50 63Right-handed alpha
Helix 56
AG2
B
64 66Right-handed 310
Helix 57
AG3
B
72 99Right-handed alpha
Helix 58
AG4
B
106 123Right-handed alpha
Helix 59
AG5
B
124 126Right-handed 310
Helix 60
AG6
B
130 145Right-handed alpha
Helix 61
AG7
B
152 167Right-handed alpha
Helix 62
AG8
B
171 183Right-handed alpha
Helix 63
AG9
B
184 186Right-handed 310
Helix 64
AH1
B
206 217Right-handed alpha
Helix 65
AH2
B
219 230Right-handed alpha
Helix 66
AH3
B
236 243Right-handed alpha
Helix 67
AH4
B
244 246Right-handed 310
Helix 68
AH5
B
248 258Right-handed alpha
Helix 69
AH6
B
258 264Right-handed alpha
Helix 70
AH7
B
265 271Right-handed alpha
Helix 71
AH8
B
272 286Right-handed alpha
Helix 72
AH9
B
288 301Right-handed alpha
Helix 73
AI1
B
301 307Right-handed alpha
Helix 74
AI2
B
310 319Right-handed alpha
Helix 75
AI3
B
325 337Right-handed alpha
Helix 76
AI4
B
337 344Right-handed alpha
Helix 77
AI5
B
349 353Right-handed 310
Helix 78
AI6
B
355 372Right-handed alpha
Helix 79
AI7
B
374 379Right-handed alpha
Helix 80
AI8
B
384 401Right-handed alpha
Helix 81
AI9
B
414 431Right-handed alpha
Helix 82
AJ1
B
437 453Right-handed alpha
Helix 83
AJ2
B
457 471Right-handed alpha
Helix 84
AJ3
B
475 496Right-handed alpha
Helix 85
AJ4
B
571 587Right-handed alpha
Helix 86
AJ5
B
592 596Right-handed 310
Helix 87
AJ6
B
597 606Right-handed alpha
Helix 88
AJ7
B
606 612Right-handed alpha
Helix 89
AJ8
B
617 631Right-handed alpha
Helix 90
AJ9
B
633 651Right-handed alpha
Helix 91
AK1
B
652 671Right-handed alpha
Helix 92
AK2
B
672 675Right-handed 310
Helix 93
AK3
B
682 695Right-handed alpha
Helix 94
AK4
B
699 716Right-handed alpha
Helix 95
AK5
B
721 734Right-handed alpha
Helix 96
AK6
B
735 739Right-handed 310
Helix 97
AK7
B
740 758Right-handed alpha
Helix 98
AK8
B
758 786Right-handed alpha
Helix 99
AK9
B
798 811Right-handed alpha
Helix 100
AL1
B
812 815Right-handed 310
Helix 101
AL2
B
826 839Right-handed alpha
Helix 102
AL3
B
840 842Right-handed 310
Helix 103
AL4
B
844 854Right-handed alpha
Helix 104
AL5
B
855 858Right-handed 310
Helix 105
AL6
B
865 882Right-handed alpha
Helix 106
AL7
B
886 910Right-handed alpha
Helix 107
AL8
D
385 399Right-handed alpha
Helix 108
AL9
D
468 475Right-handed alpha
Helix 109
AM1
D
486 491Right-handed 310
Helix 110
AM2
D
505 511Right-handed alpha
Helix 111
AM3
C
470 476Right-handed 310
Helix 112
AM4
C
505 511Right-handed alpha
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There are no sheets in PDB entry 5OQQ
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