Analysis of interatomic Contacts of Structural Units in PDB entry:
5OQR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OQR entry

There are 4 chains in PDB entry 5OQR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ALA 821
B
 CYS 3GLU 820
C
 ARG 477MET 537
D
 GLU 420VAL 539
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are107 helices in PDB entry 5OQR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
16 25Right-handed alpha
Helix 3
AA3
A
33 43Right-handed alpha
Helix 4
AA4
A
51 70Right-handed alpha
Helix 5
AA5
A
77 87Right-handed alpha
Helix 6
AA6
A
88 90Right-handed 310
Helix 7
AA7
A
93 109Right-handed alpha
Helix 8
AA8
A
115 130Right-handed alpha
Helix 9
AA9
A
134 146Right-handed alpha
Helix 10
AB1
A
147 149Right-handed 310
Helix 11
AB2
A
158 170Right-handed alpha
Helix 12
AB3
A
172 183Right-handed alpha
Helix 13
AB4
A
189 196Right-handed alpha
Helix 14
AB5
A
197 199Right-handed 310
Helix 15
AB6
A
201 211Right-handed alpha
Helix 16
AB7
A
218 222Right-handed 310
Helix 17
AB8
A
223 236Right-handed alpha
Helix 18
AB9
A
239 253Right-handed alpha
Helix 19
AC1
A
253 258Right-handed alpha
Helix 20
AC2
A
261 267Right-handed alpha
Helix 21
AC3
A
274 289Right-handed alpha
Helix 22
AC4
A
289 294Right-handed alpha
Helix 23
AC5
A
299 305Right-handed alpha
Helix 24
AC6
A
307 325Right-handed alpha
Helix 25
AC7
A
326 331Right-handed alpha
Helix 26
AC8
A
335 349Right-handed alpha
Helix 27
AC9
A
350 351Right-handed 310
Helix 28
AD1
A
352 354Right-handed 310
Helix 29
AD2
A
355 373Right-handed alpha
Helix 30
AD3
A
377 395Right-handed alpha
Helix 31
AD4
A
398 413Right-handed alpha
Helix 32
AD5
A
415 435Right-handed alpha
Helix 33
AD6
A
492 507Right-handed alpha
Helix 34
AD7
A
514 525Right-handed alpha
Helix 35
AD8
A
525 531Right-handed alpha
Helix 36
AD9
A
534 550Right-handed alpha
Helix 37
AE1
A
552 570Right-handed alpha
Helix 38
AE2
A
571 590Right-handed alpha
Helix 39
AE3
A
591 596Right-handed 310
Helix 40
AE4
A
597 610Right-handed alpha
Helix 41
AE5
A
614 633Right-handed alpha
Helix 42
AE6
A
635 649Right-handed alpha
Helix 43
AE7
A
650 653Right-handed 310
Helix 44
AE8
A
655 671Right-handed alpha
Helix 45
AE9
A
673 697Right-handed alpha
Helix 46
AF1
A
703 718Right-handed alpha
Helix 47
AF2
A
719 723Right-handed 310
Helix 48
AF3
A
740 753Right-handed alpha
Helix 49
AF4
A
759 772Right-handed alpha
Helix 50
AF5
A
779 795Right-handed alpha
Helix 51
AF6
A
801 821Right-handed alpha
Helix 52
AF7
B
4 8Right-handed alpha
Helix 53
AF8
B
18 26Right-handed alpha
Helix 54
AF9
B
34 43Right-handed alpha
Helix 55
AG1
B
44 46Right-handed 310
Helix 56
AG2
B
52 68Right-handed alpha
Helix 57
AG3
B
80 87Right-handed alpha
Helix 58
AG4
B
93 109Right-handed alpha
Helix 59
AG5
B
116 130Right-handed alpha
Helix 60
AG6
B
134 149Right-handed alpha
Helix 61
AG7
B
157 170Right-handed alpha
Helix 62
AG8
B
172 183Right-handed alpha
Helix 63
AG9
B
189 195Right-handed alpha
Helix 64
AH1
B
196 199Right-handed 310
Helix 65
AH2
B
201 211Right-handed alpha
Helix 66
AH3
B
211 216Right-handed alpha
Helix 67
AH4
B
223 235Right-handed alpha
Helix 68
AH5
B
239 258Right-handed alpha
Helix 69
AH6
B
261 268Right-handed alpha
Helix 70
AH7
B
274 289Right-handed alpha
Helix 71
AH8
B
290 296Right-handed 310
Helix 72
AH9
B
299 305Right-handed alpha
Helix 73
AI1
B
307 325Right-handed alpha
Helix 74
AI2
B
326 331Right-handed alpha
Helix 75
AI3
B
335 349Right-handed alpha
Helix 76
AI4
B
350 351Right-handed 310
Helix 77
AI5
B
352 354Right-handed 310
Helix 78
AI6
B
355 373Right-handed alpha
Helix 79
AI7
B
377 395Right-handed alpha
Helix 80
AI8
B
398 413Right-handed alpha
Helix 81
AI9
B
415 432Right-handed alpha
Helix 82
AJ1
B
489 507Right-handed alpha
Helix 83
AJ2
B
516 525Right-handed alpha
Helix 84
AJ3
B
525 532Right-handed alpha
Helix 85
AJ4
B
534 550Right-handed alpha
Helix 86
AJ5
B
552 570Right-handed alpha
Helix 87
AJ6
B
571 590Right-handed alpha
Helix 88
AJ7
B
591 596Right-handed 310
Helix 89
AJ8
B
597 611Right-handed alpha
Helix 90
AJ9
B
614 633Right-handed alpha
Helix 91
AK1
B
635 649Right-handed alpha
Helix 92
AK2
B
650 653Right-handed 310
Helix 93
AK3
B
655 673Right-handed alpha
Helix 94
AK4
B
673 695Right-handed alpha
Helix 95
AK5
B
706 718Right-handed alpha
Helix 96
AK6
B
719 723Right-handed 310
Helix 97
AK7
B
740 753Right-handed alpha
Helix 98
AK8
B
754 756Right-handed 310
Helix 99
AK9
B
759 768Right-handed alpha
Helix 100
AL1
B
769 772Right-handed 310
Helix 101
AL2
B
779 795Right-handed alpha
Helix 102
AL3
B
801 818Right-handed alpha
Helix 103
AL4
C
490 496Right-handed alpha
Helix 104
AL5
C
524 528Right-handed 310
Helix 105
AL6
D
421 426Right-handed alpha
Helix 106
AL7
D
490 495Right-handed alpha
Helix 107
AL8
D
524 529Right-handed alpha
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There are no sheets in PDB entry 5OQR
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