Analysis of interatomic Contacts of Structural Units in PDB entry:
5OR1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OR1 entry

There is 1 chain in PDB entry 5OR1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 423LYS 802
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 3 helices in PDB entry 5OR1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
448 452Right-handed 310
Helix 2
AA2
A
542 552Right-handed alpha
Helix 3
AA3
A
643 647Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 5OR1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 17 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 439first strand
Strand 2
A
431 433anti-parallel
Strand 3
A
796 800anti-parallel
Strand 4
A
775 786anti-parallel
Strand 5
A
761 772anti-parallel
Strand 6
A
728 738anti-parallel
Strand 7
A
703 713anti-parallel
Strand 8
A
624 633anti-parallel
Strand 9
A
605 616anti-parallel
Strand 10
A
586 596anti-parallel
Strand 11
A
565 575anti-parallel
Strand 12
A
523 533anti-parallel
Strand 13
A
508 517anti-parallel
Strand 14
A
484 494anti-parallel
Strand 15
A
466 475anti-parallel
Strand 16
A
455 461anti-parallel
Strand 17
A
442 446anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
505 506first strand
Strand 2
A
535 537anti-parallel
Strand 3
A
561 562anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
658 659first strand
Strand 2
A
793 794anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il