Analysis of interatomic Contacts of Structural Units in PDB entry:
5ORE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ORE entry

There is 1 chain in PDB entry 5ORE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 21HIS 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5ORE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 61Right-handed alpha
Helix 2
AA2
A
70 74Right-handed 310
Helix 3
AA3
A
75 80Right-handed alpha
Helix 4
AA4
A
93 99Right-handed alpha
Helix 5
AA5
A
119 123Right-handed 310
Helix 6
AA6
A
136 151Right-handed alpha
Helix 7
AA7
A
162 173Right-handed alpha
Helix 8
AA8
A
183 194Right-handed alpha
Helix 9
AA9
A
203 210Right-handed alpha
Helix 10
AB1
A
211 216Right-handed 310
Helix 11
AB2
A
228 230Right-handed 310
Helix 12
AB3
A
241 258Right-handed alpha
Helix 13
AB4
A
259 270Right-handed alpha
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There are 4 sheets in PDB entry 5ORE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 68first strand
Strand 2
A
24 29parallel
Strand 3
A
85 86parallel
Strand 4
A
236 238anti-parallel
Strand 5
A
100 102anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
37 38anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 108first strand
Strand 2
A
232 233anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
218 226parallel
Strand 3
A
110 116anti-parallel
Strand 4
A
198 202anti-parallel
Strand 5
A
155 159parallel
Strand 6
A
177 181parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il