Analysis of interatomic Contacts of Structural Units in PDB entry:
5ORF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ORF entry

There are 3 chains in PDB entry 5ORF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1ALA 583
B
 ASP 1ALA 583
C
 ASP 1CYS 90
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are129 helices in PDB entry 5ORF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 76Right-handed alpha
Helix 5
AA5
A
89 93Right-handed 310
Helix 6
AA6
A
96 105Right-handed alpha
Helix 7
AA7
A
118 129Right-handed alpha
Helix 8
AA8
A
129 145Right-handed alpha
Helix 9
AA9
A
149 168Right-handed alpha
Helix 10
AB1
A
172 206Right-handed alpha
Helix 11
AB2
A
206 222Right-handed alpha
Helix 12
AB3
A
226 246Right-handed alpha
Helix 13
AB4
A
248 266Right-handed alpha
Helix 14
AB5
A
266 271Right-handed alpha
Helix 15
AB6
A
281 291Right-handed alpha
Helix 16
AB7
A
304 309Right-handed alpha
Helix 17
AB8
A
313 321Right-handed alpha
Helix 18
AB9
A
321 335Right-handed alpha
Helix 19
AC1
A
341 360Right-handed alpha
Helix 20
AC2
A
364 370Right-handed alpha
Helix 21
AC3
A
371 380Right-handed alpha
Helix 22
AC4
A
380 414Right-handed alpha
Helix 23
AC5
A
418 437Right-handed alpha
Helix 24
AC6
A
440 464Right-handed alpha
Helix 25
AC7
A
469 478Right-handed alpha
Helix 26
AC8
A
482 490Right-handed alpha
Helix 27
AC9
A
502 506Right-handed 310
Helix 28
AD1
A
510 515Right-handed alpha
Helix 29
AD2
A
516 535Right-handed alpha
Helix 30
AD3
A
539 559Right-handed alpha
Helix 31
AD4
A
562 583Right-handed alpha
Helix 32
AD5
B
5 15Right-handed alpha
Helix 33
AD6
B
15 31Right-handed alpha
Helix 34
AD7
B
35 56Right-handed alpha
Helix 35
AD8
B
65 75Right-handed alpha
Helix 36
AD9
B
76 78Right-handed 310
Helix 37
AE1
B
79 84Right-handed alpha
Helix 38
AE2
B
96 104Right-handed alpha
Helix 39
AE3
B
118 129Right-handed alpha
Helix 40
AE4
B
129 145Right-handed alpha
Helix 41
AE5
B
149 168Right-handed alpha
Helix 42
AE6
B
172 206Right-handed alpha
Helix 43
AE7
B
206 222Right-handed alpha
Helix 44
AE8
B
226 246Right-handed alpha
Helix 45
AE9
B
248 266Right-handed alpha
Helix 46
AF1
B
267 270Right-handed 310
Helix 47
AF2
B
276 280Right-handed 310
Helix 48
AF3
B
281 292Right-handed alpha
Helix 49
AF4
B
303 309Right-handed alpha
Helix 50
AF5
B
313 321Right-handed alpha
Helix 51
AF6
B
321 337Right-handed alpha
Helix 52
AF7
B
341 360Right-handed alpha
Helix 53
AF8
B
364 371Right-handed alpha
Helix 54
AF9
B
371 376Right-handed alpha
Helix 55
AG1
B
377 398Right-handed alpha
Helix 56
AG2
B
398 414Right-handed alpha
Helix 57
AG3
B
418 437Right-handed alpha
Helix 58
AG4
B
443 466Right-handed alpha
Helix 59
AG5
B
469 479Right-handed alpha
Helix 60
AG6
B
482 489Right-handed alpha
Helix 61
AG7
B
502 506Right-handed 310
Helix 62
AG8
B
509 514Right-handed 310
Helix 63
AG9
B
516 535Right-handed alpha
Helix 64
AH1
B
539 560Right-handed alpha
Helix 65
AH2
B
562 583Right-handed alpha
Helix 66
AH3
C
5 15Right-handed alpha
Helix 67
AH4
C
15 31Right-handed alpha
Helix 68
AH5
C
35 56Right-handed alpha
Helix 69
AH6
C
65 75Right-handed alpha
Helix 70
AH7
C
79 84Right-handed alpha
Helix 71
AH8
C
86 91Right-handed alpha
Helix 72
AH9
C
96 104Right-handed alpha
Helix 73
AI1
C
118 129Right-handed alpha
Helix 74
AI2
C
129 145Right-handed alpha
Helix 75
AI3
C
149 168Right-handed alpha
Helix 76
AI4
C
172 206Right-handed alpha
Helix 77
AI5
C
206 222Right-handed alpha
Helix 78
AI6
C
226 247Right-handed alpha
Helix 79
AI7
C
248 266Right-handed alpha
Helix 80
AI8
C
267 270Right-handed 310
Helix 81
AI9
C
281 290Right-handed alpha
Helix 82
AJ1
C
304 309Right-handed alpha
Helix 83
AJ2
C
313 321Right-handed alpha
Helix 84
AJ3
C
321 337Right-handed alpha
Helix 85
AJ4
C
341 361Right-handed alpha
Helix 86
AJ5
C
364 370Right-handed alpha
Helix 87
AJ6
C
371 377Right-handed alpha
Helix 88
AJ7
C
377 414Right-handed alpha
Helix 89
AJ8
C
418 437Right-handed alpha
Helix 90
AJ9
C
440 466Right-handed alpha
Helix 91
AK1
C
469 479Right-handed alpha
Helix 92
AK2
C
482 489Right-handed alpha
Helix 93
AK3
C
502 507Right-handed 310
Helix 94
AK4
C
509 514Right-handed 310
Helix 95
AK5
C
516 535Right-handed alpha
Helix 96
AK6
C
539 560Right-handed alpha
Helix 97
AK7
C
562 583Right-handed alpha
Helix 98
AK8
D
5 15Right-handed alpha
Helix 99
AK9
D
15 31Right-handed alpha
Helix 100
AL1
D
35 56Right-handed alpha
Helix 101
AL2
D
65 73Right-handed alpha
Helix 102
AL3
D
86 91Right-handed alpha
Helix 103
AL4
D
96 104Right-handed alpha
Helix 104
AL5
D
118 129Right-handed alpha
Helix 105
AL6
D
129 145Right-handed alpha
Helix 106
AL7
D
149 169Right-handed alpha
Helix 107
AL8
D
172 206Right-handed alpha
Helix 108
AL9
D
206 222Right-handed alpha
Helix 109
AM1
D
226 245Right-handed alpha
Helix 110
AM2
D
248 266Right-handed alpha
Helix 111
AM3
D
266 271Right-handed alpha
Helix 112
AM4
D
274 280Right-handed alpha
Helix 113
AM5
D
281 292Right-handed alpha
Helix 114
AM6
D
304 309Right-handed alpha
Helix 115
AM7
D
313 321Right-handed alpha
Helix 116
AM8
D
321 337Right-handed alpha
Helix 117
AM9
D
341 360Right-handed alpha
Helix 118
AN1
D
364 370Right-handed alpha
Helix 119
AN2
D
371 376Right-handed alpha
Helix 120
AN3
D
377 414Right-handed alpha
Helix 121
AN4
D
418 437Right-handed alpha
Helix 122
AN5
D
440 466Right-handed alpha
Helix 123
AN6
D
469 478Right-handed alpha
Helix 124
AN7
D
482 490Right-handed alpha
Helix 125
AN8
D
502 507Right-handed 310
Helix 126
AN9
D
509 514Right-handed 310
Helix 127
AO1
D
516 535Right-handed alpha
Helix 128
AO2
D
539 559Right-handed alpha
Helix 129
AO3
D
562 583Right-handed alpha
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There are no sheets in PDB entry 5ORF
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