Analysis of interatomic Contacts of Structural Units in PDB entry:
5OSQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OSQ entry

There are 2 chains in PDB entry 5OSQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LEU 474
B
 LYS 2TYR 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5OSQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 32Right-handed alpha
Helix 2
2
A
44 52Right-handed alpha
Helix 3
3
A
65 73Right-handed 310
Helix 4
4
A
84 89Right-handed alpha
Helix 5
5
A
92 98Right-handed alpha
Helix 6
6
A
130 143Right-handed 310
Helix 7
7
A
155 164Right-handed alpha
Helix 8
8
A
187 201Right-handed alpha
Helix 9
9
A
211 220Right-handed alpha
Helix 10
10
A
230 239Right-handed 310
Helix 11
11
A
274 283Right-handed alpha
Helix 12
12
A
288 297Right-handed alpha
Helix 13
13
A
306 312Right-handed alpha
Helix 14
14
A
316 327Right-handed alpha
Helix 15
15
A
335 352Right-handed 310
Helix 16
16
A
358 371Right-handed alpha
Helix 17
17
A
398 400Right-handed 310
Helix 18
18
A
425 428Right-handed alpha
Helix 19
19
B
18 32Right-handed alpha
Helix 20
20
B
44 52Right-handed alpha
Helix 21
21
B
65 73Right-handed 310
Helix 22
22
B
84 89Right-handed alpha
Helix 23
23
B
92 98Right-handed alpha
Helix 24
24
B
130 143Right-handed 310
Helix 25
25
B
155 164Right-handed alpha
Helix 26
26
B
187 201Right-handed alpha
Helix 27
27
B
211 220Right-handed alpha
Helix 28
28
B
230 239Right-handed 310
Helix 29
29
B
274 283Right-handed alpha
Helix 30
30
B
288 297Right-handed alpha
Helix 31
31
B
306 312Right-handed alpha
Helix 32
32
B
316 327Right-handed alpha
Helix 33
33
B
335 352Right-handed 310
Helix 34
34
B
358 371Right-handed alpha
Helix 35
35
B
398 400Right-handed 310
Helix 36
36
B
425 428Right-handed alpha
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There are 13 sheets in PDB entry 5OSQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 11first strand
Strand 2
A
36 39parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
261 267anti-parallel
Strand 3
A
107 112anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 228first strand
Strand 2
A
115 119anti-parallel
Strand 3
A
243 246anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 376first strand
Strand 2
A
380 386anti-parallel
Strand 3
A
418 424anti-parallel
Strand 4
A
411 414anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 403first strand
Strand 2
A
438 447anti-parallel
Strand 3
A
463 472anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 435first strand
Strand 2
A
439 442anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 11first strand
Strand 2
B
35 39parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 64first strand
Strand 2
B
261 267anti-parallel
Strand 3
B
107 112anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 228first strand
Strand 2
B
115 119anti-parallel
Strand 3
B
243 246anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 173first strand
Strand 2
B
176 178anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 376first strand
Strand 2
B
380 386anti-parallel
Strand 3
B
418 424anti-parallel
Strand 4
B
411 414anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 403first strand
Strand 2
B
438 447anti-parallel
Strand 3
B
463 472anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 435first strand
Strand 2
B
439 442anti-parallel
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