Analysis of interatomic Contacts of Structural Units in PDB entry:
5OSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OSX entry

There are 4 chains in PDB entry 5OSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 32VAL 217
B
 GLU 32VAL 217
C
 GLU 32GLY 188
D
 GLU 32THR 167
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5OSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 58Right-handed 310
Helix 2
AA2
A
69 79Right-handed alpha
Helix 3
AA3
A
81 85Right-handed 310
Helix 4
AA4
A
120 125Right-handed alpha
Helix 5
AA5
A
125 139Right-handed alpha
Helix 6
AA6
A
142 147Right-handed 310
Helix 7
AA7
A
172 187Right-handed alpha
Helix 8
AA8
B
56 58Right-handed 310
Helix 9
AA9
B
69 77Right-handed alpha
Helix 10
AB1
B
81 85Right-handed 310
Helix 11
AB2
B
118 125Right-handed alpha
Helix 12
AB3
B
125 139Right-handed alpha
Helix 13
AB4
B
142 147Right-handed 310
Helix 14
AB5
B
172 187Right-handed alpha
Helix 15
AB6
C
69 79Right-handed alpha
Helix 16
AB7
C
81 85Right-handed 310
Helix 17
AB8
C
118 125Right-handed alpha
Helix 18
AB9
C
125 139Right-handed alpha
Helix 19
AC1
C
142 149Right-handed 310
Helix 20
AC2
C
174 187Right-handed alpha
Helix 21
AC3
D
69 77Right-handed alpha
Helix 22
AC4
D
81 85Right-handed 310
Helix 23
AC5
D
104 109Right-handed alpha
Helix 24
AC6
D
120 125Right-handed alpha
Helix 25
AC7
D
125 139Right-handed alpha
Helix 26
AC8
D
142 149Right-handed 310
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There are 4 sheets in PDB entry 5OSX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 68first strand
Strand 2
A
38 48anti-parallel
Strand 3
A
90 95anti-parallel
Strand 4
A
149 155anti-parallel
Strand 5
A
162 167anti-parallel
Strand 6
A
111 116anti-parallel
Strand 7
A
195 199anti-parallel
Strand 8
A
215 217anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 68first strand
Strand 2
B
38 48anti-parallel
Strand 3
B
90 95anti-parallel
Strand 4
B
149 155anti-parallel
Strand 5
B
162 167anti-parallel
Strand 6
B
111 116anti-parallel
Strand 7
B
195 199anti-parallel
Strand 8
B
215 217anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 68first strand
Strand 2
C
38 48anti-parallel
Strand 3
C
90 95anti-parallel
Strand 4
C
151 155anti-parallel
Strand 5
C
162 166anti-parallel
Strand 6
C
113 116anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 68first strand
Strand 2
D
38 48anti-parallel
Strand 3
D
90 95anti-parallel
Strand 4
D
151 155anti-parallel
Strand 5
D
161 166anti-parallel
Strand 6
D
113 117anti-parallel
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