Analysis of interatomic Contacts of Structural Units in PDB entry:
5OSY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OSY entry

There are 2 chains in PDB entry 5OSY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 37GLN 336
B
 VAL 40GLN 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5OSY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 99Right-handed alpha
Helix 2
AA2
A
121 125Right-handed 310
Helix 3
AA3
A
136 144Right-handed alpha
Helix 4
AA4
A
154 161Right-handed alpha
Helix 5
AA5
A
161 167Right-handed alpha
Helix 6
AA6
A
173 181Right-handed alpha
Helix 7
AA7
A
185 189Right-handed 310
Helix 8
AA8
A
212 215Right-handed 310
Helix 9
AA9
A
229 233Right-handed 310
Helix 10
AB1
A
234 236Right-handed 310
Helix 11
AB2
A
237 257Right-handed alpha
Helix 12
AB3
A
259 261Right-handed 310
Helix 13
AB4
A
298 308Right-handed alpha
Helix 14
AB5
A
310 315Right-handed alpha
Helix 15
AB6
A
325 336Right-handed alpha
Helix 16
AB7
B
90 99Right-handed alpha
Helix 17
AB8
B
121 125Right-handed 310
Helix 18
AB9
B
136 144Right-handed alpha
Helix 19
AC1
B
154 161Right-handed alpha
Helix 20
AC2
B
161 168Right-handed alpha
Helix 21
AC3
B
173 181Right-handed alpha
Helix 22
AC4
B
185 189Right-handed 310
Helix 23
AC5
B
229 233Right-handed 310
Helix 24
AC6
B
234 236Right-handed 310
Helix 25
AC7
B
237 257Right-handed alpha
Helix 26
AC8
B
259 261Right-handed 310
Helix 27
AC9
B
298 308Right-handed alpha
Helix 28
AD1
B
310 315Right-handed alpha
Helix 29
AD2
B
325 336Right-handed alpha
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There are 6 sheets in PDB entry 5OSY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 56first strand
Strand 2
A
61 68anti-parallel
Strand 3
A
78 86anti-parallel
Strand 4
A
127 132anti-parallel
Strand 5
B
113 118anti-parallel
Strand 6
B
104 110anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 110first strand
Strand 2
A
113 118anti-parallel
Strand 3
B
127 132anti-parallel
Strand 4
B
78 86anti-parallel
Strand 5
B
61 68anti-parallel
Strand 6
B
48 56anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 153first strand
Strand 2
A
317 322anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
200 204anti-parallel
Strand 3
A
217 222anti-parallel
Strand 4
A
277 282anti-parallel
Strand 5
A
263 268anti-parallel
Strand 6
A
295 297anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 153first strand
Strand 2
B
317 322anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 193first strand
Strand 2
B
200 204anti-parallel
Strand 3
B
217 222anti-parallel
Strand 4
B
277 282anti-parallel
Strand 5
B
263 268anti-parallel
Strand 6
B
295 297anti-parallel
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