Analysis of interatomic Contacts of Structural Units in PDB entry:
5OU8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OU8 entry

There are 17 chains in PDB entry 5OU8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0THR 173
B
 LEU 5THR 173
C
 GLY 1PRO 2
C
 GLY 4PRO 5
C
 GLY 7PRO 8
C
 GLY 10PRO 11
C
 GLY 13PRO 14
D
 GLY 1PRO 2
D
 GLY 4PRO 5
D
 GLY 7PRO 8
D
 GLY 10PRO 11
D
 GLY 13PRO 14
E
 GLY 1PRO 2
E
 GLY 4PRO 5
E
 GLY 7PRO 8
E
 GLY 10PRO 11
E
 GLY 13PRO 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 5OU8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 63Right-handed 310
Helix 2
AA2
B
59 63Right-handed 310
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There are 11 sheets in PDB entry 5OU8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
24 29anti-parallel
Strand 3
A
52 55anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
83 88parallel
Strand 3
A
64 72anti-parallel
Strand 4
A
36 41anti-parallel
Strand 5
A
47 48anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
83 88parallel
Strand 3
A
64 72anti-parallel
Strand 4
A
75 76anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 100first strand
Strand 2
A
105 111anti-parallel
Strand 3
A
137 141anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 133first strand
Strand 2
A
118 123anti-parallel
Strand 3
A
146 153anti-parallel
Strand 4
A
168 170anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
24 29anti-parallel
Strand 3
B
52 55anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 19first strand
Strand 2
B
83 88parallel
Strand 3
B
64 72anti-parallel
Strand 4
B
36 41anti-parallel
Strand 5
B
46 48anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 19first strand
Strand 2
B
83 88parallel
Strand 3
B
64 72anti-parallel
Strand 4
B
75 76anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 100first strand
Strand 2
B
106 111anti-parallel
Strand 3
B
137 140anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 133first strand
Strand 2
B
118 123anti-parallel
Strand 3
B
146 154anti-parallel
Strand 4
B
157 161anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 133first strand
Strand 2
B
118 123anti-parallel
Strand 3
B
146 154anti-parallel
Strand 4
B
168 170anti-parallel
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