Analysis of interatomic Contacts of Structural Units in PDB entry:
5OUQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5OUQ entry

There are 5 chains in PDB entry 5OUQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 465	GLN 800
C	ALA 465	GLN 800
D	ALA 465	GLN 800
E	ALA 465	GLN 800
F	ALA 465	PHE 665

There are 60 helices in PDB entry 5OUQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	539	549	Right-handed alpha
Helix 2	AA2	A	567	579	Right-handed alpha
Helix 3	AA3	A	609	618	Right-handed alpha
Helix 4	AA4	A	623	627	Right-handed 310
Helix 5	AA5	A	633	640	Right-handed alpha
Helix 6	AA6	A	643	648	Right-handed alpha
Helix 7	AA7	A	650	662	Right-handed alpha
Helix 8	AA8	A	747	759	Right-handed alpha
Helix 9	AA9	A	773	776	Right-handed 310
Helix 10	AB1	A	777	795	Right-handed alpha
Helix 11	AB2	C	539	550	Right-handed alpha
Helix 12	AB3	C	567	579	Right-handed alpha
Helix 13	AB4	C	609	618	Right-handed alpha
Helix 14	AB5	C	623	627	Right-handed 310
Helix 15	AB6	C	633	640	Right-handed alpha
Helix 16	AB7	C	643	648	Right-handed alpha
Helix 17	AB8	C	650	662	Right-handed alpha
Helix 18	AB9	C	747	759	Right-handed alpha
Helix 19	AC1	C	773	776	Right-handed 310
Helix 20	AC2	C	777	795	Right-handed alpha
Helix 21	AC3	D	539	549	Right-handed alpha
Helix 22	AC4	D	567	579	Right-handed alpha
Helix 23	AC5	D	609	618	Right-handed alpha
Helix 24	AC6	D	623	627	Right-handed 310
Helix 25	AC7	D	633	640	Right-handed alpha
Helix 26	AC8	D	643	648	Right-handed alpha
Helix 27	AC9	D	650	662	Right-handed alpha
Helix 28	AD1	D	747	759	Right-handed alpha
Helix 29	AD2	D	773	776	Right-handed 310
Helix 30	AD3	D	777	795	Right-handed alpha
Helix 31	AD4	E	539	550	Right-handed alpha
Helix 32	AD5	E	567	579	Right-handed alpha
Helix 33	AD6	E	609	618	Right-handed alpha
Helix 34	AD7	E	623	627	Right-handed 310
Helix 35	AD8	E	633	640	Right-handed alpha
Helix 36	AD9	E	643	648	Right-handed alpha
Helix 37	AE1	E	650	662	Right-handed alpha
Helix 38	AE2	E	747	759	Right-handed alpha
Helix 39	AE3	E	773	776	Right-handed 310
Helix 40	AE4	E	777	795	Right-handed alpha
Helix 41	AE5	F	539	549	Right-handed alpha
Helix 42	AE6	F	567	579	Right-handed alpha
Helix 43	AE7	F	609	618	Right-handed alpha
Helix 44	AE8	F	623	627	Right-handed 310
Helix 45	AE9	F	633	640	Right-handed alpha
Helix 46	AF1	F	643	648	Right-handed alpha
Helix 47	AF2	F	650	662	Right-handed alpha
Helix 48	AF3	F	747	759	Right-handed alpha
Helix 49	AF4	F	773	776	Right-handed 310
Helix 50	AF5	F	777	795	Right-handed alpha
Helix 51	AF6	G	539	549	Right-handed alpha
Helix 52	AF7	G	567	579	Right-handed alpha
Helix 53	AF8	G	609	618	Right-handed alpha
Helix 54	AF9	G	623	627	Right-handed 310
Helix 55	AG1	G	633	640	Right-handed alpha
Helix 56	AG2	G	643	648	Right-handed alpha
Helix 57	AG3	G	650	662	Right-handed alpha
Helix 58	AG4	G	747	761	Right-handed alpha
Helix 59	AG5	G	773	776	Right-handed 310
Helix 60	AG6	G	777	796	Right-handed alpha

There are 18 sheets in PDB entry 5OUQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	524	first strand
Strand 2	A	582	598	anti-parallel
Strand 3	A	668	682	anti-parallel
Strand 4	A	730	737	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	529	537	first strand
Strand 2	A	584	592	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	551	553	first strand
Strand 2	A	766	771	parallel
Strand 3	A	664	670	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	520	524	first strand
Strand 2	C	582	598	anti-parallel
Strand 3	C	668	682	anti-parallel
Strand 4	C	730	737	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	529	537	first strand
Strand 2	C	584	592	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	551	553	first strand
Strand 2	C	766	771	parallel
Strand 3	C	664	670	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	520	524	first strand
Strand 2	D	582	598	anti-parallel
Strand 3	D	668	682	anti-parallel
Strand 4	D	730	737	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	529	537	first strand
Strand 2	D	584	592	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	551	553	first strand
Strand 2	D	766	771	parallel
Strand 3	D	664	670	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	520	524	first strand
Strand 2	E	582	598	anti-parallel
Strand 3	E	668	682	anti-parallel
Strand 4	E	730	737	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	529	537	first strand
Strand 2	E	584	592	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	551	553	first strand
Strand 2	E	766	771	parallel
Strand 3	E	664	670	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	520	524	first strand
Strand 2	F	582	598	anti-parallel
Strand 3	F	668	682	anti-parallel
Strand 4	F	730	737	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	529	537	first strand
Strand 2	F	584	592	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	551	553	first strand
Strand 2	F	766	771	parallel
Strand 3	F	664	670	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	520	524	first strand
Strand 2	G	582	598	anti-parallel
Strand 3	G	668	682	anti-parallel
Strand 4	G	730	737	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	529	537	first strand
Strand 2	G	584	592	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	551	553	first strand
Strand 2	G	766	771	parallel
Strand 3	G	664	670	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5OUQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
5OUQ