Analysis of interatomic Contacts of Structural Units in PDB entry:
5OV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OV3 entry

There are 3 chains in PDB entry 5OV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 18GLU 347
B
 ALA 17ALA 333
C
 GLU 361GLY 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 5OV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
227 234Right-handed alpha
Helix 2
AA2
B
19 24Right-handed alpha
Helix 3
AA3
B
227 234Right-handed alpha
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There are 14 sheets in PDB entry 5OV3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 32first strand
Strand 2
A
38 43anti-parallel
Strand 3
A
47 52anti-parallel
Strand 4
A
57 63anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 74first strand
Strand 2
A
80 84anti-parallel
Strand 3
A
89 94anti-parallel
Strand 4
A
100 105anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 115first strand
Strand 2
A
122 127anti-parallel
Strand 3
A
133 136anti-parallel
Strand 4
A
142 144anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 159first strand
Strand 2
A
165 170anti-parallel
Strand 3
A
174 179anti-parallel
Strand 4
A
185 190anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 206first strand
Strand 2
A
212 217anti-parallel
Strand 3
A
222 226anti-parallel
Strand 4
A
243 245anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
265 270anti-parallel
Strand 3
A
275 280anti-parallel
Strand 4
A
286 291anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 303first strand
Strand 2
A
309 314anti-parallel
Strand 3
A
317 322anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 344first strand
Strand 2
B
317 326parallel
Strand 3
B
309 314anti-parallel
Strand 4
B
298 303anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 32first strand
Strand 2
B
38 43anti-parallel
Strand 3
B
47 52anti-parallel
Strand 4
B
57 63anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 74first strand
Strand 2
B
80 85anti-parallel
Strand 3
B
89 94anti-parallel
Strand 4
B
99 105anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 115first strand
Strand 2
B
122 127anti-parallel
Strand 3
B
133 136anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 159first strand
Strand 2
B
165 169anti-parallel
Strand 3
B
174 179anti-parallel
Strand 4
B
185 190anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 206first strand
Strand 2
B
212 217anti-parallel
Strand 3
B
222 226anti-parallel
Strand 4
B
243 245anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 259first strand
Strand 2
B
265 270anti-parallel
Strand 3
B
275 280anti-parallel
Strand 4
B
285 291anti-parallel
Strand 5
C
363 365parallel
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