Analysis of interatomic Contacts of Structural Units in PDB entry:
5OVK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OVK entry

There are 4 chains in PDB entry 5OVK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 14HIS 255
B
 ALA 14HIS 255
C
 ALA 14HIS 255
D
 ALA 14HIS 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5OVK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 47Right-handed alpha
Helix 2
AA2
A
72 88Right-handed alpha
Helix 3
AA3
A
104 108Right-handed 310
Helix 4
AA4
A
109 121Right-handed alpha
Helix 5
AA5
A
121 139Right-handed alpha
Helix 6
AA6
A
149 154Right-handed alpha
Helix 7
AA7
A
158 180Right-handed alpha
Helix 8
AA8
A
196 202Right-handed alpha
Helix 9
AA9
A
203 212Right-handed alpha
Helix 10
AB1
A
221 234Right-handed alpha
Helix 11
AB2
B
33 47Right-handed alpha
Helix 12
AB3
B
72 88Right-handed alpha
Helix 13
AB4
B
104 108Right-handed 310
Helix 14
AB5
B
109 121Right-handed alpha
Helix 15
AB6
B
121 139Right-handed alpha
Helix 16
AB7
B
149 154Right-handed alpha
Helix 17
AB8
B
158 180Right-handed alpha
Helix 18
AB9
B
210 214Right-handed 310
Helix 19
AC1
B
221 234Right-handed alpha
Helix 20
AC2
C
33 47Right-handed alpha
Helix 21
AC3
C
72 88Right-handed alpha
Helix 22
AC4
C
104 108Right-handed 310
Helix 23
AC5
C
109 121Right-handed alpha
Helix 24
AC6
C
121 139Right-handed alpha
Helix 25
AC7
C
149 154Right-handed alpha
Helix 26
AC8
C
158 180Right-handed alpha
Helix 27
AC9
C
221 233Right-handed alpha
Helix 28
AD1
D
33 47Right-handed alpha
Helix 29
AD2
D
72 88Right-handed alpha
Helix 30
AD3
D
104 108Right-handed 310
Helix 31
AD4
D
109 121Right-handed alpha
Helix 32
AD5
D
121 139Right-handed alpha
Helix 33
AD6
D
149 154Right-handed alpha
Helix 34
AD7
D
158 180Right-handed alpha
Helix 35
AD8
D
194 198Right-handed 310
Helix 36
AD9
D
221 233Right-handed alpha
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There are 4 sheets in PDB entry 5OVK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 67first strand
Strand 2
A
49 54parallel
Strand 3
A
25 29parallel
Strand 4
A
92 95parallel
Strand 5
A
141 146parallel
Strand 6
A
184 191parallel
Strand 7
A
244 247parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 67first strand
Strand 2
B
49 54parallel
Strand 3
B
25 29parallel
Strand 4
B
92 95parallel
Strand 5
B
141 146parallel
Strand 6
B
184 191parallel
Strand 7
B
244 247parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 67first strand
Strand 2
C
49 54parallel
Strand 3
C
25 29parallel
Strand 4
C
92 95parallel
Strand 5
C
141 146parallel
Strand 6
C
184 191parallel
Strand 7
C
244 247parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
64 67first strand
Strand 2
D
49 54parallel
Strand 3
D
25 29parallel
Strand 4
D
92 95parallel
Strand 5
D
141 146parallel
Strand 6
D
184 191parallel
Strand 7
D
244 247parallel
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