Analysis of interatomic Contacts of Structural Units in PDB entry:
5OW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OW0 entry

There are 2 chains in PDB entry 5OW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MSE 1LEU 251
A
 MSE 1LYS 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5OW0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
16 20Right-handed 310
Helix 2
AA2
B
36 54Right-handed alpha
Helix 3
AA3
B
64 66Right-handed 310
Helix 4
AA4
B
67 78Right-handed alpha
Helix 5
AA5
B
91 105Right-handed alpha
Helix 6
AA6
B
125 135Right-handed alpha
Helix 7
AA7
B
178 182Right-handed 310
Helix 8
AA8
B
187 195Right-handed alpha
Helix 9
AA9
B
233 248Right-handed alpha
Helix 10
AB1
A
10 25Right-handed alpha
Helix 11
AB2
A
52 56Right-handed 310
Helix 12
AB3
A
58 68Right-handed alpha
Helix 13
AB4
A
77 92Right-handed alpha
Helix 14
AB5
A
172 176Right-handed 310
Helix 15
AB6
A
184 187Right-handed 310
Helix 16
AB7
A
189 191Right-handed 310
Helix 17
AB8
A
192 202Right-handed alpha
Helix 18
AB9
A
209 215Right-handed alpha
Helix 19
AC1
A
219 223Right-handed 310
Helix 20
AC2
A
244 249Right-handed alpha
Helix 21
AC3
A
266 271Right-handed 310
Helix 22
AC4
A
279 292Right-handed alpha
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There are 6 sheets in PDB entry 5OW0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 202first strand
Strand 2
B
81 86parallel
Strand 3
B
56 63parallel
Strand 4
B
2 6parallel
Strand 5
B
111 115parallel
Strand 6
B
172 175parallel
Strand 7
B
138 148parallel
Strand 8
B
151 157anti-parallel
Strand 9
B
161 168anti-parallel
Strand 10
A
158 165anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 11first strand
Strand 2
B
33 35anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
26 27anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
212 218first strand
Strand 2
A
117 123anti-parallel
Strand 3
A
108 112anti-parallel
Strand 4
A
101 102anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 228first strand
Strand 2
A
274 277parallel
Strand 3
A
256 261parallel
Strand 4
A
235 239parallel
Strand 5
A
178 182parallel
Strand 6
A
205 208parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 99first strand
Strand 2
A
128 132parallel
Strand 3
A
71 75parallel
Strand 4
A
3 7parallel
Strand 5
A
29 33parallel
Strand 6
A
45 48parallel
Strand 7
A
149 150parallel
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