Analysis of interatomic Contacts of Structural Units in PDB entry:
5OW3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OW3 entry

There is 1 chain in PDB entry 5OW3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ILE 25ALA 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5OW3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
130 135Right-handed alpha
Helix 2
AA2
C
170 178Right-handed alpha
Helix 3
AA3
C
286 288Right-handed 310
Helix 4
AA4
C
301 307Right-handed alpha
Helix 5
AA5
C
323 337Right-handed alpha
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There are 7 sheets in PDB entry 5OW3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 37first strand
Strand 2
C
46 58anti-parallel
Strand 3
C
372 379anti-parallel
Strand 4
C
236 243anti-parallel
Strand 5
C
228 231anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
217 222first strand
Strand 2
C
207 212anti-parallel
Strand 3
C
91 96anti-parallel
Strand 4
C
66 71anti-parallel
Strand 5
C
383 388anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
281 284first strand
Strand 2
C
256 261anti-parallel
Strand 3
C
192 204anti-parallel
Strand 4
C
100 112anti-parallel
Strand 5
C
363 366anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 122first strand
Strand 2
C
181 187anti-parallel
Strand 3
C
154 157anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
393 399first strand
Strand 2
C
413 418anti-parallel
Strand 3
C
451 454anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
410 411first strand
Strand 2
C
457 458anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
442 446first strand
Strand 2
C
424 431anti-parallel
Strand 3
C
467 475anti-parallel
Strand 4
C
481 490anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il