Analysis of interatomic Contacts of Structural Units in PDB entry:
5OWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OWF entry

There is 1 chain in PDB entry 5OWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 25ASP 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5OWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 63Right-handed alpha
Helix 2
AA2
A
72 74Right-handed 310
Helix 3
AA3
A
75 82Right-handed alpha
Helix 4
AA4
A
95 100Right-handed alpha
Helix 5
AA5
A
126 131Right-handed alpha
Helix 6
AA6
A
141 151Right-handed alpha
Helix 7
AA7
A
152 155Right-handed 310
Helix 8
AA8
A
163 173Right-handed alpha
Helix 9
AA9
A
183 190Right-handed alpha
Helix 10
AB1
A
193 197Right-handed 310
Helix 11
AB2
A
208 213Right-handed alpha
Helix 12
AB3
A
224 241Right-handed alpha
Helix 13
AB4
A
242 252Right-handed alpha
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There are 3 sheets in PDB entry 5OWF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 70first strand
Strand 2
A
26 31parallel
Strand 3
A
87 88parallel
Strand 4
A
219 220anti-parallel
Strand 5
A
103 104anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
39 41anti-parallel
Strand 3
A
47 48anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 161first strand
Strand 2
A
134 138parallel
Strand 3
A
178 182parallel
Strand 4
A
113 118anti-parallel
Strand 5
A
199 201anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il