Analysis of interatomic Contacts of Structural Units in PDB entry:
5OWI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OWI entry

There are 2 chains in PDB entry 5OWI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 432
B
 MET 1ALA 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5OWI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 39Right-handed alpha
Helix 2
AA2
A
41 45Right-handed 310
Helix 3
AA3
A
50 59Right-handed alpha
Helix 4
AA4
A
62 83Right-handed alpha
Helix 5
AA5
A
133 148Right-handed alpha
Helix 6
AA6
A
197 202Right-handed alpha
Helix 7
AA7
A
262 298Right-handed alpha
Helix 8
AA8
A
303 323Right-handed alpha
Helix 9
AA9
A
327 332Right-handed 310
Helix 10
AB1
A
333 358Right-handed alpha
Helix 11
AB2
A
363 376Right-handed alpha
Helix 12
AB3
A
380 391Right-handed alpha
Helix 13
AB4
A
391 415Right-handed alpha
Helix 14
AB5
A
423 429Right-handed alpha
Helix 15
AB6
B
20 39Right-handed alpha
Helix 16
AB7
B
41 45Right-handed 310
Helix 17
AB8
B
50 59Right-handed alpha
Helix 18
AB9
B
62 83Right-handed alpha
Helix 19
AC1
B
133 148Right-handed alpha
Helix 20
AC2
B
197 202Right-handed alpha
Helix 21
AC3
B
251 255Right-handed 310
Helix 22
AC4
B
262 298Right-handed alpha
Helix 23
AC5
B
303 323Right-handed alpha
Helix 24
AC6
B
327 332Right-handed 310
Helix 25
AC7
B
333 358Right-handed alpha
Helix 26
AC8
B
363 376Right-handed alpha
Helix 27
AC9
B
380 391Right-handed alpha
Helix 28
AD1
B
391 415Right-handed alpha
Helix 29
AD2
B
423 429Right-handed alpha
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There are 10 sheets in PDB entry 5OWI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
12 14anti-parallel
Strand 3
A
105 106anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 129first strand
Strand 2
A
416 421parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 153first strand
Strand 2
A
239 244anti-parallel
Strand 3
A
163 166anti-parallel
Strand 4
A
185 188anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
176 181anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 216first strand
Strand 2
A
230 233anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
12 14anti-parallel
Strand 3
B
105 106anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 129first strand
Strand 2
B
416 421parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 153first strand
Strand 2
B
239 244anti-parallel
Strand 3
B
163 165anti-parallel
Strand 4
B
186 188anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 171first strand
Strand 2
B
176 181anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
213 216first strand
Strand 2
B
230 233anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il