Analysis of interatomic Contacts of Structural Units in PDB entry:
5OWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OWJ entry

There are 2 chains in PDB entry 5OWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 432
B
 MET 1ALA 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5OWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 39Right-handed alpha
Helix 2
AA2
A
41 45Right-handed 310
Helix 3
AA3
A
50 58Right-handed alpha
Helix 4
AA4
A
62 82Right-handed alpha
Helix 5
AA5
A
119 122Right-handed 310
Helix 6
AA6
A
133 147Right-handed alpha
Helix 7
AA7
A
197 202Right-handed alpha
Helix 8
AA8
A
249 254Right-handed 310
Helix 9
AA9
A
262 298Right-handed alpha
Helix 10
AB1
A
303 324Right-handed alpha
Helix 11
AB2
A
327 332Right-handed 310
Helix 12
AB3
A
333 359Right-handed alpha
Helix 13
AB4
A
363 376Right-handed alpha
Helix 14
AB5
A
380 390Right-handed alpha
Helix 15
AB6
A
391 415Right-handed alpha
Helix 16
AB7
A
423 428Right-handed alpha
Helix 17
AB8
B
20 39Right-handed alpha
Helix 18
AB9
B
41 45Right-handed 310
Helix 19
AC1
B
50 58Right-handed alpha
Helix 20
AC2
B
62 83Right-handed alpha
Helix 21
AC3
B
119 122Right-handed 310
Helix 22
AC4
B
133 147Right-handed alpha
Helix 23
AC5
B
197 203Right-handed alpha
Helix 24
AC6
B
262 298Right-handed alpha
Helix 25
AC7
B
303 324Right-handed alpha
Helix 26
AC8
B
327 332Right-handed 310
Helix 27
AC9
B
334 359Right-handed alpha
Helix 28
AD1
B
363 376Right-handed alpha
Helix 29
AD2
B
380 390Right-handed alpha
Helix 30
AD3
B
391 413Right-handed alpha
Helix 31
AD4
B
423 428Right-handed alpha
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There are 6 sheets in PDB entry 5OWJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
13 14anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 129first strand
Strand 2
A
416 421parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 171first strand
Strand 2
A
176 188anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
13 14anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 129first strand
Strand 2
B
416 421parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 171first strand
Strand 2
B
176 188anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il