Analysis of interatomic Contacts of Structural Units in PDB entry:
5OWN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OWN entry

There are 2 chains in PDB entry 5OWN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 465PRO 799
B
 PRO 464PRO 799
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5OWN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
539 550Right-handed alpha
Helix 2
AA2
A
567 579Right-handed alpha
Helix 3
AA3
A
609 617Right-handed alpha
Helix 4
AA4
A
623 627Right-handed 310
Helix 5
AA5
A
633 640Right-handed alpha
Helix 6
AA6
A
643 649Right-handed alpha
Helix 7
AA7
A
650 662Right-handed alpha
Helix 8
AA8
A
683 693Right-handed alpha
Helix 9
AA9
A
695 704Right-handed alpha
Helix 10
AB1
A
747 761Right-handed alpha
Helix 11
AB2
A
773 776Right-handed 310
Helix 12
AB3
A
777 796Right-handed alpha
Helix 13
AB4
B
539 549Right-handed alpha
Helix 14
AB5
B
567 580Right-handed alpha
Helix 15
AB6
B
609 617Right-handed alpha
Helix 16
AB7
B
623 627Right-handed 310
Helix 17
AB8
B
633 640Right-handed alpha
Helix 18
AB9
B
643 648Right-handed alpha
Helix 19
AC1
B
650 662Right-handed alpha
Helix 20
AC2
B
683 693Right-handed alpha
Helix 21
AC3
B
695 704Right-handed alpha
Helix 22
AC4
B
748 761Right-handed alpha
Helix 23
AC5
B
773 776Right-handed 310
Helix 24
AC6
B
777 796Right-handed alpha
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There are 4 sheets in PDB entry 5OWN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 495first strand
Strand 2
A
471 473anti-parallel
Strand 3
A
664 682anti-parallel
Strand 4
A
763 771anti-parallel
Strand 5
A
551 553parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 537first strand
Strand 2
A
582 598anti-parallel
Strand 3
A
664 682anti-parallel
Strand 4
A
731 737anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 495first strand
Strand 2
B
471 473anti-parallel
Strand 3
B
664 682anti-parallel
Strand 4
B
763 771anti-parallel
Strand 5
B
551 553parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
522 537first strand
Strand 2
B
582 597anti-parallel
Strand 3
B
664 682anti-parallel
Strand 4
B
730 737anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il