Analysis of interatomic Contacts of Structural Units in PDB entry:
5OWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OWX entry

There are 3 chains in PDB entry 5OWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 ARG 27ALA 208
2
 SER 29VAL 210
3
 GLY 1GLN 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5OWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
1
31 35Right-handed 310
Helix 2
AA2
1
52 56Right-handed 310
Helix 3
AA3
1
60 69Right-handed alpha
Helix 4
AA4
1
94 98Right-handed 310
Helix 5
AA5
1
99 103Right-handed 310
Helix 6
AA6
2
46 52Right-handed alpha
Helix 7
AA7
2
89 97Right-handed alpha
Helix 8
AA8
2
134 139Right-handed 310
Helix 9
AA9
2
170 174Right-handed 310
Helix 10
AB1
3
83 87Right-handed 310
Helix 11
AB2
3
89 96Right-handed alpha
Helix 12
AB3
3
136 141Right-handed alpha
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There are 8 sheets in PDB entry 5OWX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
48 51first strand
Strand 2
1
164 167anti-parallel
Strand 3
1
87 88anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
114 115first strand
Strand 2
1
73 83anti-parallel
Strand 3
1
170 184anti-parallel
Strand 4
3
40 41anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
65 68first strand
Strand 2
2
198 200anti-parallel
Strand 3
2
110 111anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
78 79first strand
Strand 2
2
177 189anti-parallel
Strand 3
2
117 127anti-parallel
Strand 4
2
145 148anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
158 160first strand
Strand 2
2
102 107anti-parallel
Strand 3
2
203 209anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
100 101first strand
Strand 2
3
212 213anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
105 106first strand
Strand 2
3
205 206anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
121 124first strand
Strand 2
3
186 189anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il