Analysis of interatomic Contacts of Structural Units in PDB entry:
5OXK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OXK entry

There is 1 chain in PDB entry 5OXK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6SER 472
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5OXK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 46Right-handed alpha
Helix 2
AA2
A
52 81Right-handed alpha
Helix 3
AA3
A
83 104Right-handed alpha
Helix 4
AA4
A
107 109Right-handed 310
Helix 5
AA5
A
110 136Right-handed alpha
Helix 6
AA6
A
142 174Right-handed alpha
Helix 7
AA7
A
174 201Right-handed alpha
Helix 8
AA8
A
202 207Right-handed 310
Helix 9
AA9
A
213 215Right-handed 310
Helix 10
AB1
A
216 241Right-handed alpha
Helix 11
AB2
A
245 269Right-handed alpha
Helix 12
AB3
A
284 301Right-handed alpha
Helix 13
AB4
A
304 314Right-handed alpha
Helix 14
AB5
A
320 325Right-handed 310
Helix 15
AB6
A
326 345Right-handed alpha
Helix 16
AB7
A
352 379Right-handed alpha
Helix 17
AB8
A
386 402Right-handed alpha
Helix 18
AB9
A
421 442Right-handed alpha
Helix 19
AC1
A
443 445Right-handed 310
Helix 20
AC2
A
449 472Right-handed alpha
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There are no sheets in PDB entry 5OXK
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il