Analysis of interatomic Contacts of Structural Units in PDB entry:
5Q0I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Q0I entry

There are 2 chains in PDB entry 5Q0I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 247VAL 475
B
 PRO 746ALA 757
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5Q0I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
250 265Right-handed alpha
Helix 2
AA2
A
270 280Right-handed alpha
Helix 3
AA3
A
283 308Right-handed alpha
Helix 4
AA4
A
311 315Right-handed 310
Helix 5
AA5
A
316 343Right-handed alpha
Helix 6
AA6
A
347 358Right-handed alpha
Helix 7
AA7
A
365 378Right-handed alpha
Helix 8
AA8
A
382 395Right-handed alpha
Helix 9
AA9
A
404 427Right-handed alpha
Helix 10
AB1
A
432 450Right-handed alpha
Helix 11
AB2
A
450 458Right-handed alpha
Helix 12
AB3
A
466 474Right-handed alpha
Helix 13
AB4
B
747 755Right-handed alpha
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There are no sheets in PDB entry 5Q0I
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