Analysis of interatomic Contacts of Structural Units in PDB entry:
5Q0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Q0Q entry

There are 4 chains in PDB entry 5Q0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 247ASP 474
B
 GLN 747LYS 755
C
 MET 247ASP 474
D
 LYS 744LYS 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5Q0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
250 265Right-handed alpha
Helix 2
AA2
A
270 280Right-handed alpha
Helix 3
AA3
A
283 308Right-handed alpha
Helix 4
AA4
A
316 342Right-handed alpha
Helix 5
AA5
A
347 358Right-handed alpha
Helix 6
AA6
A
362 378Right-handed alpha
Helix 7
AA7
A
382 395Right-handed alpha
Helix 8
AA8
A
404 427Right-handed alpha
Helix 9
AA9
A
432 445Right-handed alpha
Helix 10
AB1
A
446 457Right-handed alpha
Helix 11
AB2
A
466 473Right-handed alpha
Helix 12
AB3
B
748 754Right-handed alpha
Helix 13
AB4
C
250 267Right-handed alpha
Helix 14
AB5
C
270 280Right-handed alpha
Helix 15
AB6
C
283 308Right-handed alpha
Helix 16
AB7
C
316 342Right-handed alpha
Helix 17
AB8
C
345 358Right-handed alpha
Helix 18
AB9
C
362 378Right-handed alpha
Helix 19
AC1
C
382 395Right-handed alpha
Helix 20
AC2
C
404 427Right-handed alpha
Helix 21
AC3
C
432 445Right-handed alpha
Helix 22
AC4
C
446 457Right-handed alpha
Helix 23
AC5
C
466 474Right-handed alpha
Helix 24
AC6
D
746 754Right-handed alpha
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There are no sheets in PDB entry 5Q0Q
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