Analysis of interatomic Contacts of Structural Units in PDB entry:
5QSW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5QSW entry

There are 4 chains in PDB entry 5QSW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 85GLY 403
A
 GLY 84GLY 403
B
 GLY 85GLY 403
D
 THR 86GLY 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 5QSW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
86 92Right-handed alpha
Helix 2
AA2
C
96 112Right-handed alpha
Helix 3
AA3
C
112 128Right-handed alpha
Helix 4
AA4
C
135 142Right-handed alpha
Helix 5
AA5
C
143 154Right-handed alpha
Helix 6
AA6
C
168 172Right-handed 310
Helix 7
AA7
C
173 190Right-handed alpha
Helix 8
AA8
C
198 212Right-handed alpha
Helix 9
AA9
C
215 259Right-handed alpha
Helix 10
AB1
C
264 295Right-handed alpha
Helix 11
AB2
C
295 300Right-handed alpha
Helix 12
AB3
C
304 322Right-handed alpha
Helix 13
AB4
C
322 327Right-handed alpha
Helix 14
AB5
C
328 340Right-handed alpha
Helix 15
AB6
C
343 360Right-handed alpha
Helix 16
AB7
C
363 366Right-handed 310
Helix 17
AB8
C
367 381Right-handed alpha
Helix 18
AB9
C
382 384Right-handed 310
Helix 19
AC1
C
386 403Right-handed alpha
Helix 20
AC2
A
86 94Right-handed alpha
Helix 21
AC3
A
96 112Right-handed alpha
Helix 22
AC4
A
112 128Right-handed alpha
Helix 23
AC5
A
135 142Right-handed alpha
Helix 24
AC6
A
143 153Right-handed alpha
Helix 25
AC7
A
162 166Right-handed 310
Helix 26
AC8
A
170 189Right-handed alpha
Helix 27
AC9
A
190 192Right-handed 310
Helix 28
AD1
A
198 211Right-handed alpha
Helix 29
AD2
A
215 245Right-handed alpha
Helix 30
AD3
A
268 295Right-handed alpha
Helix 31
AD4
A
295 300Right-handed alpha
Helix 32
AD5
A
304 322Right-handed alpha
Helix 33
AD6
A
322 327Right-handed alpha
Helix 34
AD7
A
328 339Right-handed alpha
Helix 35
AD8
A
343 359Right-handed alpha
Helix 36
AD9
A
363 380Right-handed alpha
Helix 37
AE1
A
388 402Right-handed alpha
Helix 38
AE2
B
86 94Right-handed alpha
Helix 39
AE3
B
96 112Right-handed alpha
Helix 40
AE4
B
112 128Right-handed alpha
Helix 41
AE5
B
135 141Right-handed alpha
Helix 42
AE6
B
144 154Right-handed alpha
Helix 43
AE7
B
168 172Right-handed 310
Helix 44
AE8
B
173 190Right-handed alpha
Helix 45
AE9
B
198 211Right-handed alpha
Helix 46
AF1
B
215 244Right-handed alpha
Helix 47
AF2
B
244 252Right-handed alpha
Helix 48
AF3
B
269 295Right-handed alpha
Helix 49
AF4
B
295 300Right-handed alpha
Helix 50
AF5
B
304 322Right-handed alpha
Helix 51
AF6
B
322 327Right-handed alpha
Helix 52
AF7
B
328 338Right-handed alpha
Helix 53
AF8
B
339 341Right-handed 310
Helix 54
AF9
B
343 359Right-handed alpha
Helix 55
AG1
B
363 381Right-handed alpha
Helix 56
AG2
B
382 384Right-handed 310
Helix 57
AG3
B
386 402Right-handed alpha
Helix 58
AG4
D
87 94Right-handed alpha
Helix 59
AG5
D
96 112Right-handed alpha
Helix 60
AG6
D
112 128Right-handed alpha
Helix 61
AG7
D
135 142Right-handed alpha
Helix 62
AG8
D
143 153Right-handed alpha
Helix 63
AG9
D
168 190Right-handed alpha
Helix 64
AH1
D
192 196Right-handed 310
Helix 65
AH2
D
198 213Right-handed alpha
Helix 66
AH3
D
215 253Right-handed alpha
Helix 67
AH4
D
266 295Right-handed alpha
Helix 68
AH5
D
295 300Right-handed alpha
Helix 69
AH6
D
304 322Right-handed alpha
Helix 70
AH7
D
322 327Right-handed alpha
Helix 71
AH8
D
328 339Right-handed alpha
Helix 72
AH9
D
343 359Right-handed alpha
Helix 73
AI1
D
360 362Right-handed 310
Helix 74
AI2
D
363 381Right-handed alpha
Helix 75
AI3
D
382 384Right-handed 310
Helix 76
AI4
D
388 403Right-handed alpha
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There are no sheets in PDB entry 5QSW
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