Analysis of interatomic Contacts of Structural Units in PDB entry:
5RG9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5RG9 entry

There are 2 chains in PDB entry 5RG9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4GLN 303
B
 GLN 4GLN 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5RG9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 13Right-handed alpha
Helix 2
AA2
A
23 28Right-handed alpha
Helix 3
AA3
A
31 40Right-handed alpha
Helix 4
AA4
A
50 55Right-handed alpha
Helix 5
AA5
A
63 76Right-handed alpha
Helix 6
AA6
A
87 91Right-handed 310
Helix 7
AA7
A
92 97Right-handed alpha
Helix 8
AA8
A
100 119Right-handed alpha
Helix 9
AA9
A
142 148Right-handed alpha
Helix 10
AB1
A
151 164Right-handed alpha
Helix 11
AB2
A
181 197Right-handed alpha
Helix 12
AB3
A
214 227Right-handed alpha
Helix 13
AB4
A
244 258Right-handed alpha
Helix 14
AB5
A
270 274Right-handed 310
Helix 15
AB6
A
276 280Right-handed 310
Helix 16
AB7
A
291 303Right-handed alpha
Helix 17
AB8
B
5 13Right-handed alpha
Helix 18
AB9
B
23 28Right-handed alpha
Helix 19
AC1
B
31 40Right-handed alpha
Helix 20
AC2
B
50 55Right-handed alpha
Helix 21
AC3
B
63 76Right-handed alpha
Helix 22
AC4
B
87 91Right-handed 310
Helix 23
AC5
B
92 97Right-handed alpha
Helix 24
AC6
B
100 119Right-handed alpha
Helix 25
AC7
B
142 148Right-handed alpha
Helix 26
AC8
B
151 164Right-handed alpha
Helix 27
AC9
B
181 197Right-handed alpha
Helix 28
AD1
B
214 227Right-handed alpha
Helix 29
AD2
B
244 258Right-handed alpha
Helix 30
AD3
B
270 274Right-handed 310
Helix 31
AD4
B
276 280Right-handed 310
Helix 32
AD5
B
291 303Right-handed alpha
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There are 2 sheets in PDB entry 5RG9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 22first strand
Strand 2
A
42 45parallel
Strand 3
A
79 82parallel
Strand 4
A
125 130parallel
Strand 5
A
168 174parallel
Strand 6
A
203 210parallel
Strand 7
A
232 240parallel
Strand 8
A
261 266parallel
Strand 9
A
17 22parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 22first strand
Strand 2
B
42 45parallel
Strand 3
B
79 82parallel
Strand 4
B
125 130parallel
Strand 5
B
168 174parallel
Strand 6
B
203 210parallel
Strand 7
B
232 240parallel
Strand 8
B
261 266parallel
Strand 9
B
17 22parallel
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