Analysis of interatomic Contacts of Structural Units in PDB entry:
5RW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5RW1 entry

There are 2 chains in PDB entry 5RW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 32ALA 898
B
 ARG 28ALA 898
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 5RW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 46Right-handed alpha
Helix 2
AA2
A
47 50Right-handed 310
Helix 3
AA3
A
65 73Right-handed alpha
Helix 4
AA4
A
93 106Right-handed alpha
Helix 5
AA5
A
118 135Right-handed alpha
Helix 6
AA6
A
138 163Right-handed alpha
Helix 7
AA7
A
176 192Right-handed alpha
Helix 8
AA8
A
204 212Right-handed alpha
Helix 9
AA9
A
216 225Right-handed alpha
Helix 10
AB1
A
240 244Right-handed 310
Helix 11
AB2
A
271 287Right-handed alpha
Helix 12
AB3
A
289 293Right-handed 310
Helix 13
AB4
A
312 318Right-handed alpha
Helix 14
AB5
A
319 328Right-handed alpha
Helix 15
AB6
A
354 356Right-handed 310
Helix 16
AB7
A
361 370Right-handed 310
Helix 17
AB8
A
380 399Right-handed alpha
Helix 18
AB9
A
419 423Right-handed 310
Helix 19
AC1
A
424 434Right-handed alpha
Helix 20
AC2
A
436 448Right-handed alpha
Helix 21
AC3
A
452 473Right-handed alpha
Helix 22
AC4
A
506 517Right-handed alpha
Helix 23
AC5
A
527 533Right-handed alpha
Helix 24
AC6
A
533 545Right-handed alpha
Helix 25
AC7
A
549 564Right-handed alpha
Helix 26
AC8
A
597 602Right-handed 310
Helix 27
AC9
A
619 633Right-handed alpha
Helix 28
AD1
A
644 650Right-handed 310
Helix 29
AD2
A
651 658Right-handed alpha
Helix 30
AD3
A
661 667Right-handed alpha
Helix 31
AD4
A
691 699Right-handed alpha
Helix 32
AD5
A
720 734Right-handed alpha
Helix 33
AD6
A
746 750Right-handed 310
Helix 34
AD7
A
757 762Right-handed 310
Helix 35
AD8
A
777 781Right-handed 310
Helix 36
AD9
A
790 801Right-handed alpha
Helix 37
AE1
A
802 807Right-handed 310
Helix 38
AE2
A
821 830Right-handed alpha
Helix 39
AE3
A
831 833Right-handed 310
Helix 40
AE4
A
850 863Right-handed alpha
Helix 41
AE5
A
881 897Right-handed alpha
Helix 42
AE6
B
32 46Right-handed alpha
Helix 43
AE7
B
47 50Right-handed 310
Helix 44
AE8
B
65 73Right-handed alpha
Helix 45
AE9
B
93 106Right-handed alpha
Helix 46
AF1
B
118 135Right-handed alpha
Helix 47
AF2
B
138 163Right-handed alpha
Helix 48
AF3
B
176 192Right-handed alpha
Helix 49
AF4
B
204 213Right-handed alpha
Helix 50
AF5
B
216 225Right-handed alpha
Helix 51
AF6
B
240 244Right-handed 310
Helix 52
AF7
B
271 287Right-handed alpha
Helix 53
AF8
B
289 293Right-handed 310
Helix 54
AF9
B
312 318Right-handed alpha
Helix 55
AG1
B
319 328Right-handed alpha
Helix 56
AG2
B
354 356Right-handed 310
Helix 57
AG3
B
361 370Right-handed 310
Helix 58
AG4
B
380 399Right-handed alpha
Helix 59
AG5
B
419 423Right-handed 310
Helix 60
AG6
B
424 434Right-handed alpha
Helix 61
AG7
B
436 448Right-handed alpha
Helix 62
AG8
B
452 473Right-handed alpha
Helix 63
AG9
B
474 477Right-handed 310
Helix 64
AH1
B
506 517Right-handed alpha
Helix 65
AH2
B
527 533Right-handed alpha
Helix 66
AH3
B
533 545Right-handed alpha
Helix 67
AH4
B
549 564Right-handed alpha
Helix 68
AH5
B
597 602Right-handed 310
Helix 69
AH6
B
619 633Right-handed alpha
Helix 70
AH7
B
644 650Right-handed 310
Helix 71
AH8
B
651 658Right-handed alpha
Helix 72
AH9
B
661 667Right-handed alpha
Helix 73
AI1
B
691 699Right-handed alpha
Helix 74
AI2
B
720 734Right-handed alpha
Helix 75
AI3
B
746 750Right-handed 310
Helix 76
AI4
B
757 762Right-handed 310
Helix 77
AI5
B
777 781Right-handed 310
Helix 78
AI6
B
790 801Right-handed alpha
Helix 79
AI7
B
802 807Right-handed 310
Helix 80
AI8
B
821 830Right-handed alpha
Helix 81
AI9
B
850 863Right-handed alpha
Helix 82
AJ1
B
881 897Right-handed alpha
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There are 11 sheets in PDB entry 5RW1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
91 92anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 112first strand
Strand 2
A
372 377anti-parallel
Strand 3
A
402 407parallel
Strand 4
A
338 344parallel
Strand 5
A
304 311parallel
Strand 6
A
195 199parallel
Strand 7
A
257 262parallel
Strand 8
A
247 251anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 348first strand
Strand 2
A
351 352anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
610 614first strand
Strand 2
A
567 572parallel
Strand 3
A
636 641parallel
Strand 4
A
673 677parallel
Strand 5
A
740 744parallel
Strand 6
A
714 716parallel
Strand 7
A
816 818anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
587 588first strand
Strand 2
A
595 596anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
770 771first strand
Strand 2
A
809 814anti-parallel
Strand 3
A
783 787parallel
Strand 4
A
837 845parallel
Strand 5
A
867 871parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 112first strand
Strand 2
B
372 377anti-parallel
Strand 3
B
402 407parallel
Strand 4
B
339 344parallel
Strand 5
B
304 311parallel
Strand 6
B
195 199parallel
Strand 7
B
257 262parallel
Strand 8
B
247 251anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 348first strand
Strand 2
B
351 352anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
610 614first strand
Strand 2
B
567 572parallel
Strand 3
B
636 641parallel
Strand 4
B
673 677parallel
Strand 5
B
740 744parallel
Strand 6
B
714 716parallel
Strand 7
B
816 818anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
587 588first strand
Strand 2
B
595 596anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
770 771first strand
Strand 2
B
809 814anti-parallel
Strand 3
B
783 787parallel
Strand 4
B
837 845parallel
Strand 5
B
867 871parallel
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