Analysis of interatomic Contacts of Structural Units in PDB entry:
5S8Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5S8Q entry

There are 2 chains in PDB entry 5S8Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1314ILE 1437
B
 MET 1314HIS 1432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5S8Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1319 1335Right-handed alpha
Helix 2
AA2
A
1336 1342Right-handed 310
Helix 3
AA3
A
1352 1357Right-handed alpha
Helix 4
AA4
A
1362 1372Right-handed alpha
Helix 5
AA5
A
1377 1396Right-handed alpha
Helix 6
AA6
A
1401 1435Right-handed alpha
Helix 7
AA7
B
1320 1335Right-handed alpha
Helix 8
AA8
B
1336 1342Right-handed 310
Helix 9
AA9
B
1352 1357Right-handed alpha
Helix 10
AB1
B
1362 1372Right-handed alpha
Helix 11
AB2
B
1377 1396Right-handed alpha
Helix 12
AB3
B
1401 1432Right-handed alpha
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There are no sheets in PDB entry 5S8Q
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