Analysis of interatomic Contacts of Structural Units in PDB entry:
5SJ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SJ4 entry

There are 8 chains in PDB entry 5SJ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 458LEU 508
A
 ARG 510GLU 770
B
 GLN 457LEU 508
B
 ARG 510THR 771
C
 GLY 458LEU 508
C
 ARG 510GLU 770
D
 LEU 459LEU 508
D
 ARG 510GLY 768
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 72 helices in PDB entry 5SJ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
465 472Right-handed alpha
Helix 2
AA2
A
482 484Right-handed 310
Helix 3
AA3
A
485 499Right-handed alpha
Helix 4
AA4
A
504 519Right-handed alpha
Helix 5
AA5
A
526 544Right-handed alpha
Helix 6
AA6
A
549 563Right-handed alpha
Helix 7
AA7
A
571 578Right-handed alpha
Helix 8
AA8
A
581 586Right-handed alpha
Helix 9
AA9
A
589 604Right-handed alpha
Helix 10
AB1
A
615 633Right-handed alpha
Helix 11
AB2
A
634 636Right-handed 310
Helix 12
AB3
A
637 651Right-handed alpha
Helix 13
AB4
A
658 675Right-handed alpha
Helix 14
AB5
A
676 680Right-handed 310
Helix 15
AB6
A
681 706Right-handed alpha
Helix 16
AB7
A
711 720Right-handed 310
Helix 17
AB8
A
721 733Right-handed alpha
Helix 18
AB9
A
733 745Right-handed alpha
Helix 19
AC1
A
748 767Right-handed alpha
Helix 20
AC2
B
465 472Right-handed alpha
Helix 21
AC3
B
482 484Right-handed 310
Helix 22
AC4
B
485 497Right-handed alpha
Helix 23
AC5
B
504 518Right-handed alpha
Helix 24
AC6
B
526 543Right-handed alpha
Helix 25
AC7
B
549 563Right-handed alpha
Helix 26
AC8
B
571 579Right-handed alpha
Helix 27
AC9
B
580 586Right-handed alpha
Helix 28
AD1
B
589 604Right-handed alpha
Helix 29
AD2
B
615 633Right-handed alpha
Helix 30
AD3
B
634 651Right-handed alpha
Helix 31
AD4
B
658 675Right-handed alpha
Helix 32
AD5
B
676 679Right-handed 310
Helix 33
AD6
B
681 706Right-handed alpha
Helix 34
AD7
B
711 719Right-handed 310
Helix 35
AD8
B
721 733Right-handed alpha
Helix 36
AD9
B
733 745Right-handed alpha
Helix 37
AE1
B
748 767Right-handed alpha
Helix 38
AE2
C
465 472Right-handed alpha
Helix 39
AE3
C
485 497Right-handed alpha
Helix 40
AE4
C
504 519Right-handed alpha
Helix 41
AE5
C
526 543Right-handed alpha
Helix 42
AE6
C
544 548Right-handed 310
Helix 43
AE7
C
549 563Right-handed alpha
Helix 44
AE8
C
571 579Right-handed alpha
Helix 45
AE9
C
580 586Right-handed alpha
Helix 46
AF1
C
589 603Right-handed alpha
Helix 47
AF2
C
615 632Right-handed alpha
Helix 48
AF3
C
637 651Right-handed alpha
Helix 49
AF4
C
658 675Right-handed alpha
Helix 50
AF5
C
681 706Right-handed alpha
Helix 51
AF6
C
715 719Right-handed 310
Helix 52
AF7
C
721 733Right-handed alpha
Helix 53
AF8
C
733 745Right-handed alpha
Helix 54
AF9
C
748 767Right-handed alpha
Helix 55
AG1
D
465 472Right-handed alpha
Helix 56
AG2
D
485 498Right-handed alpha
Helix 57
AG3
D
504 518Right-handed alpha
Helix 58
AG4
D
526 544Right-handed alpha
Helix 59
AG5
D
545 548Right-handed 310
Helix 60
AG6
D
549 563Right-handed alpha
Helix 61
AG7
D
571 579Right-handed alpha
Helix 62
AG8
D
581 586Right-handed alpha
Helix 63
AG9
D
589 604Right-handed alpha
Helix 64
AH1
D
615 633Right-handed alpha
Helix 65
AH2
D
634 651Right-handed alpha
Helix 66
AH3
D
658 675Right-handed alpha
Helix 67
AH4
D
676 680Right-handed 310
Helix 68
AH5
D
681 707Right-handed alpha
Helix 69
AH6
D
718 720Right-handed 310
Helix 70
AH7
D
721 733Right-handed alpha
Helix 71
AH8
D
733 745Right-handed alpha
Helix 72
AH9
D
748 768Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5SJ4
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il