Analysis of interatomic Contacts of Structural Units in PDB entry:
5SV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SV0 entry

There are 13 chains in PDB entry 5SV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 10ILE 107
B
 GLU 109PRO 234
C
 SER 11ILE 107
C
 GLU 109ALA 232
D
 ALA 19ILE 107
D
 GLU 109HIS 233
E
 ALA 19ILE 107
E
 GLU 109PRO 234
F
 VAL 12ILE 107
F
 GLU 109PRO 234
G
 GLN 7ILE 107
G
 GLU 109VAL 235
H
 LEU 10MET 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 70 helices in PDB entry 5SV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
11 17Right-handed alpha
Helix 2
AA2
B
20 63Right-handed alpha
Helix 3
AA3
B
67 76Right-handed alpha
Helix 4
AA4
B
82 98Right-handed alpha
Helix 5
AA5
B
103 127Right-handed alpha
Helix 6
AA6
B
129 160Right-handed alpha
Helix 7
AA7
B
166 169Right-handed 310
Helix 8
AA8
B
170 233Right-handed alpha
Helix 9
AA9
C
12 17Right-handed alpha
Helix 10
AB1
C
20 64Right-handed alpha
Helix 11
AB2
C
67 75Right-handed alpha
Helix 12
AB3
C
82 98Right-handed alpha
Helix 13
AB4
C
103 127Right-handed alpha
Helix 14
AB5
C
129 163Right-handed alpha
Helix 15
AB6
C
166 232Right-handed alpha
Helix 16
AB7
D
21 63Right-handed alpha
Helix 17
AB8
D
67 76Right-handed alpha
Helix 18
AB9
D
82 98Right-handed alpha
Helix 19
AC1
D
103 128Right-handed alpha
Helix 20
AC2
D
129 161Right-handed alpha
Helix 21
AC3
D
166 169Right-handed 310
Helix 22
AC4
D
170 233Right-handed alpha
Helix 23
AC5
E
20 63Right-handed alpha
Helix 24
AC6
E
67 76Right-handed alpha
Helix 25
AC7
E
82 98Right-handed alpha
Helix 26
AC8
E
103 128Right-handed alpha
Helix 27
AC9
E
129 160Right-handed alpha
Helix 28
AD1
E
170 231Right-handed alpha
Helix 29
AD2
F
13 18Right-handed alpha
Helix 30
AD3
F
20 63Right-handed alpha
Helix 31
AD4
F
67 76Right-handed alpha
Helix 32
AD5
F
82 98Right-handed alpha
Helix 33
AD6
F
103 127Right-handed alpha
Helix 34
AD7
F
129 160Right-handed alpha
Helix 35
AD8
F
169 233Right-handed alpha
Helix 36
AD9
G
11 17Right-handed alpha
Helix 37
AE1
G
20 63Right-handed alpha
Helix 38
AE2
G
67 75Right-handed alpha
Helix 39
AE3
G
82 98Right-handed alpha
Helix 40
AE4
G
103 127Right-handed alpha
Helix 41
AE5
G
129 163Right-handed alpha
Helix 42
AE6
G
170 233Right-handed alpha
Helix 43
AE7
H
11 18Right-handed alpha
Helix 44
AE8
H
20 64Right-handed alpha
Helix 45
AE9
H
68 76Right-handed alpha
Helix 46
AF1
H
82 98Right-handed alpha
Helix 47
AF2
H
103 127Right-handed alpha
Helix 48
AF3
H
129 163Right-handed alpha
Helix 49
AF4
H
166 169Right-handed 310
Helix 50
AF5
H
170 233Right-handed alpha
Helix 51
AF6
I
12 18Right-handed alpha
Helix 52
AF7
I
21 64Right-handed alpha
Helix 53
AF8
I
67 75Right-handed alpha
Helix 54
AF9
I
82 98Right-handed alpha
Helix 55
AG1
I
103 127Right-handed alpha
Helix 56
AG2
I
129 161Right-handed alpha
Helix 57
AG3
I
166 232Right-handed alpha
Helix 58
AG4
J
20 63Right-handed alpha
Helix 59
AG5
J
67 76Right-handed alpha
Helix 60
AG6
J
82 98Right-handed alpha
Helix 61
AG7
J
103 128Right-handed alpha
Helix 62
AG8
J
129 160Right-handed alpha
Helix 63
AG9
J
170 232Right-handed alpha
Helix 64
AH1
A
11 17Right-handed alpha
Helix 65
AH2
A
20 63Right-handed alpha
Helix 66
AH3
A
67 75Right-handed alpha
Helix 67
AH4
A
82 98Right-handed alpha
Helix 68
AH5
A
103 128Right-handed alpha
Helix 69
AH6
A
129 162Right-handed alpha
Helix 70
AH7
A
170 233Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5SV0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il