Analysis of interatomic Contacts of Structural Units in PDB entry:
5SV1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SV1 entry

There are 13 chains in PDB entry 5SV1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11ILE 107
A
 GLU 109PRO 234
B
 LEU 10ILE 107
B
 GLU 109PRO 234
C
 LEU 10ILE 107
C
 GLU 109HIS 233
D
 ALA 19ILE 107
D
 GLU 109HIS 233
E
 VAL 12ILE 107
E
 GLU 109PRO 234
F
 ASP 9ILE 107
F
 GLU 109PRO 234
G
 LEU 10SER 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 5SV1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 18Right-handed alpha
Helix 2
AA2
A
20 63Right-handed alpha
Helix 3
AA3
A
67 75Right-handed alpha
Helix 4
AA4
A
82 98Right-handed alpha
Helix 5
AA5
A
103 127Right-handed alpha
Helix 6
AA6
A
129 162Right-handed alpha
Helix 7
AA7
A
171 231Right-handed alpha
Helix 8
AA8
B
11 18Right-handed alpha
Helix 9
AA9
B
20 63Right-handed alpha
Helix 10
AB1
B
68 75Right-handed alpha
Helix 11
AB2
B
82 98Right-handed alpha
Helix 12
AB3
B
103 127Right-handed alpha
Helix 13
AB4
B
129 160Right-handed alpha
Helix 14
AB5
B
166 169Right-handed 310
Helix 15
AB6
B
170 231Right-handed alpha
Helix 16
AB7
C
11 18Right-handed alpha
Helix 17
AB8
C
21 63Right-handed alpha
Helix 18
AB9
C
67 75Right-handed alpha
Helix 19
AC1
C
82 98Right-handed alpha
Helix 20
AC2
C
103 127Right-handed alpha
Helix 21
AC3
C
129 163Right-handed alpha
Helix 22
AC4
C
166 231Right-handed alpha
Helix 23
AC5
D
21 63Right-handed alpha
Helix 24
AC6
D
67 75Right-handed alpha
Helix 25
AC7
D
83 98Right-handed alpha
Helix 26
AC8
D
103 127Right-handed alpha
Helix 27
AC9
D
129 160Right-handed alpha
Helix 28
AD1
D
166 169Right-handed 310
Helix 29
AD2
D
170 231Right-handed alpha
Helix 30
AD3
E
13 17Right-handed alpha
Helix 31
AD4
E
21 63Right-handed alpha
Helix 32
AD5
E
67 75Right-handed alpha
Helix 33
AD6
E
82 98Right-handed alpha
Helix 34
AD7
E
103 127Right-handed alpha
Helix 35
AD8
E
129 163Right-handed alpha
Helix 36
AD9
E
170 231Right-handed alpha
Helix 37
AE1
F
11 17Right-handed alpha
Helix 38
AE2
F
20 63Right-handed alpha
Helix 39
AE3
F
67 75Right-handed alpha
Helix 40
AE4
F
82 98Right-handed alpha
Helix 41
AE5
F
103 127Right-handed alpha
Helix 42
AE6
F
129 161Right-handed alpha
Helix 43
AE7
F
170 233Right-handed alpha
Helix 44
AE8
G
11 18Right-handed alpha
Helix 45
AE9
G
20 63Right-handed alpha
Helix 46
AF1
G
68 75Right-handed alpha
Helix 47
AF2
G
76 79Right-handed 310
Helix 48
AF3
G
82 98Right-handed alpha
Helix 49
AF4
G
103 127Right-handed alpha
Helix 50
AF5
G
129 160Right-handed alpha
Helix 51
AF6
G
170 231Right-handed alpha
Helix 52
AF7
H
12 18Right-handed alpha
Helix 53
AF8
H
21 63Right-handed alpha
Helix 54
AF9
H
67 75Right-handed alpha
Helix 55
AG1
H
82 98Right-handed alpha
Helix 56
AG2
H
103 127Right-handed alpha
Helix 57
AG3
H
129 163Right-handed alpha
Helix 58
AG4
H
166 231Right-handed alpha
Helix 59
AG5
I
21 63Right-handed alpha
Helix 60
AG6
I
68 75Right-handed alpha
Helix 61
AG7
I
82 98Right-handed alpha
Helix 62
AG8
I
103 127Right-handed alpha
Helix 63
AG9
I
129 160Right-handed alpha
Helix 64
AH1
I
166 169Right-handed 310
Helix 65
AH2
I
170 231Right-handed alpha
Helix 66
AH3
J
21 63Right-handed alpha
Helix 67
AH4
J
67 75Right-handed alpha
Helix 68
AH5
J
76 79Right-handed 310
Helix 69
AH6
J
82 98Right-handed alpha
Helix 70
AH7
J
103 127Right-handed alpha
Helix 71
AH8
J
129 159Right-handed alpha
Helix 72
AH9
J
169 231Right-handed alpha
Helix 73
AI1
Y
4 23Right-handed alpha
Helix 74
AI2
Z
4 17Right-handed alpha
Helix 75
AI3
Z
17 22Right-handed alpha
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There are no sheets in PDB entry 5SV1
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