Analysis of interatomic Contacts of Structural Units in PDB entry:
5SXG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SXG entry

There are 2 chains in PDB entry 5SXG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 190GLN 378
B
 ARG 190GLN 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5SXG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
194 203Right-handed alpha
Helix 2
AA2
A
253 262Right-handed alpha
Helix 3
AA3
A
263 266Right-handed 310
Helix 4
AA4
A
288 300Right-handed alpha
Helix 5
AA5
A
318 329Right-handed alpha
Helix 6
AA6
A
337 349Right-handed alpha
Helix 7
AA7
A
361 378Right-handed alpha
Helix 8
AA8
B
194 203Right-handed alpha
Helix 9
AA9
B
253 262Right-handed alpha
Helix 10
AB1
B
263 266Right-handed 310
Helix 11
AB2
B
288 300Right-handed alpha
Helix 12
AB3
B
318 329Right-handed alpha
Helix 13
AB4
B
337 349Right-handed alpha
Helix 14
AB5
B
361 378Right-handed alpha
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There are 2 sheets in PDB entry 5SXG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 239first strand
Strand 2
A
215 223anti-parallel
Strand 3
A
272 281anti-parallel
Strand 4
A
303 311parallel
Strand 5
A
332 335parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 239first strand
Strand 2
B
215 221anti-parallel
Strand 3
B
273 281anti-parallel
Strand 4
B
303 311parallel
Strand 5
B
332 335parallel
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