Analysis of interatomic Contacts of Structural Units in PDB entry:
5SXP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SXP entry

There are 6 chains in PDB entry 5SXP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 183ALA 243
B
 SER 183ALA 243
C
 ASN 184ALA 243
D
 ASN 184ALA 243
F
 SER 251SER 269
G
 GLY 248ALA 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5SXP

There are 4 sheets in PDB entry 5SXP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 234first strand
Strand 2
A
221 226anti-parallel
Strand 3
A
210 215anti-parallel
Strand 4
A
188 191anti-parallel
Strand 5
A
238 240anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 234first strand
Strand 2
B
221 226anti-parallel
Strand 3
B
210 216anti-parallel
Strand 4
B
188 191anti-parallel
Strand 5
B
238 240anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 234first strand
Strand 2
C
221 226anti-parallel
Strand 3
C
210 216anti-parallel
Strand 4
C
188 191anti-parallel
Strand 5
C
238 241anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
229 234first strand
Strand 2
D
221 226anti-parallel
Strand 3
D
210 215anti-parallel
Strand 4
D
188 191anti-parallel
Strand 5
D
238 240anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il