Analysis of interatomic Contacts of Structural Units in PDB entry:
5SY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SY1 entry

There are 4 chains in PDB entry 5SY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ALA 2SER 148
A
 GLU 26GLN 630
B
 GLU 26GLN 630
D
 ALA 2SER 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 5SY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
6 19Right-handed alpha
Helix 2
AA2
C
30 40Right-handed alpha
Helix 3
AA3
C
45 57Right-handed alpha
Helix 4
AA4
C
65 77Right-handed alpha
Helix 5
AA5
C
82 94Right-handed alpha
Helix 6
AA6
C
102 113Right-handed alpha
Helix 7
AA7
C
118 127Right-handed alpha
Helix 8
AA8
C
140 148Right-handed alpha
Helix 9
AA9
A
31 59Right-handed alpha
Helix 10
AB1
A
87 107Right-handed alpha
Helix 11
AB2
A
121 129Right-handed 310
Helix 12
AB3
A
130 135Right-handed alpha
Helix 13
AB4
A
135 141Right-handed alpha
Helix 14
AB5
A
142 144Right-handed 310
Helix 15
AB6
A
146 170Right-handed alpha
Helix 16
AB7
A
180 186Right-handed alpha
Helix 17
AB8
A
186 198Right-handed alpha
Helix 18
AB9
A
199 206Right-handed alpha
Helix 19
AC1
A
207 210Right-handed 310
Helix 20
AC2
A
222 235Right-handed alpha
Helix 21
AC3
A
252 262Right-handed alpha
Helix 22
AC4
A
272 298Right-handed alpha
Helix 23
AC5
A
298 307Right-handed alpha
Helix 24
AC6
A
309 319Right-handed alpha
Helix 25
AC7
A
329 377Right-handed alpha
Helix 26
AC8
A
381 386Right-handed alpha
Helix 27
AC9
A
392 400Right-handed alpha
Helix 28
AD1
A
402 430Right-handed alpha
Helix 29
AD2
A
432 438Right-handed alpha
Helix 30
AD3
A
447 451Right-handed 310
Helix 31
AD4
A
453 472Right-handed alpha
Helix 32
AD5
A
478 480Right-handed 310
Helix 33
AD6
A
487 496Right-handed alpha
Helix 34
AD7
A
496 522Right-handed alpha
Helix 35
AD8
A
523 525Right-handed 310
Helix 36
AD9
A
532 538Right-handed 310
Helix 37
AE1
A
539 554Right-handed alpha
Helix 38
AE2
A
559 569Right-handed alpha
Helix 39
AE3
A
599 619Right-handed alpha
Helix 40
AE4
A
620 622Right-handed 310
Helix 41
AE5
A
623 628Right-handed alpha
Helix 42
AE6
B
31 59Right-handed alpha
Helix 43
AE7
B
87 107Right-handed alpha
Helix 44
AE8
B
121 129Right-handed 310
Helix 45
AE9
B
130 135Right-handed alpha
Helix 46
AF1
B
135 141Right-handed alpha
Helix 47
AF2
B
142 144Right-handed 310
Helix 48
AF3
B
146 170Right-handed alpha
Helix 49
AF4
B
180 186Right-handed alpha
Helix 50
AF5
B
186 198Right-handed alpha
Helix 51
AF6
B
199 206Right-handed alpha
Helix 52
AF7
B
207 210Right-handed 310
Helix 53
AF8
B
222 235Right-handed alpha
Helix 54
AF9
B
252 262Right-handed alpha
Helix 55
AG1
B
272 298Right-handed alpha
Helix 56
AG2
B
298 307Right-handed alpha
Helix 57
AG3
B
309 319Right-handed alpha
Helix 58
AG4
B
329 377Right-handed alpha
Helix 59
AG5
B
381 386Right-handed alpha
Helix 60
AG6
B
392 400Right-handed alpha
Helix 61
AG7
B
402 430Right-handed alpha
Helix 62
AG8
B
432 438Right-handed alpha
Helix 63
AG9
B
447 451Right-handed 310
Helix 64
AH1
B
453 472Right-handed alpha
Helix 65
AH2
B
478 480Right-handed 310
Helix 66
AH3
B
487 496Right-handed alpha
Helix 67
AH4
B
496 522Right-handed alpha
Helix 68
AH5
B
523 525Right-handed 310
Helix 69
AH6
B
532 538Right-handed 310
Helix 70
AH7
B
539 554Right-handed alpha
Helix 71
AH8
B
559 569Right-handed alpha
Helix 72
AH9
B
599 619Right-handed alpha
Helix 73
AI1
B
620 622Right-handed 310
Helix 74
AI2
B
623 628Right-handed alpha
Helix 75
AI3
D
6 19Right-handed alpha
Helix 76
AI4
D
30 40Right-handed alpha
Helix 77
AI5
D
45 57Right-handed alpha
Helix 78
AI6
D
65 77Right-handed alpha
Helix 79
AI7
D
82 94Right-handed alpha
Helix 80
AI8
D
102 113Right-handed alpha
Helix 81
AI9
D
118 127Right-handed alpha
Helix 82
AJ1
D
140 148Right-handed alpha
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There are 2 sheets in PDB entry 5SY1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 476first strand
Strand 2
A
482 484anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
474 476first strand
Strand 2
B
482 484anti-parallel
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