Analysis of interatomic Contacts of Structural Units in PDB entry:
5SYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5SYT entry

There is 1 chain in PDB entry 5SYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 10LEU 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5SYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 48Right-handed alpha
Helix 2
AA2
A
52 56Right-handed 310
Helix 3
AA3
A
60 95Right-handed alpha
Helix 4
AA4
A
96 112Right-handed alpha
Helix 5
AA5
A
118 148Right-handed alpha
Helix 6
AA6
A
148 153Right-handed alpha
Helix 7
AA7
A
159 192Right-handed alpha
Helix 8
AA8
A
195 219Right-handed alpha
Helix 9
AA9
A
219 224Right-handed alpha
Helix 10
AB1
A
232 245Right-handed alpha
Helix 11
AB2
A
257 260Right-handed 310
Helix 12
AB3
A
282 284Right-handed 310
Helix 13
AB4
A
316 320Right-handed 310
Helix 14
AB5
A
325 342Right-handed alpha
Helix 15
AB6
A
343 367Right-handed alpha
Helix 16
AB7
A
369 375Right-handed alpha
Helix 17
AB8
A
383 394Right-handed alpha
Helix 18
AB9
A
396 425Right-handed alpha
Helix 19
AC1
A
427 442Right-handed alpha
Helix 20
AC2
A
449 457Right-handed alpha
Helix 21
AC3
A
461 471Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5SYT.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
252 255anti-parallel
Strand 3
A
277 280parallel
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