Analysis of interatomic Contacts of Structural Units in PDB entry:
5T09


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T09 entry

There is 1 chain in PDB entry 5T09 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 23ASN 239
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5T09. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 47Right-handed alpha
Helix 2
AA2
A
59 75Right-handed alpha
Helix 3
AA3
A
89 100Right-handed alpha
Helix 4
AA4
A
100 113Right-handed alpha
Helix 5
AA5
A
116 133Right-handed alpha
Helix 6
AA6
A
151 164Right-handed alpha
Helix 7
AA7
A
165 180Right-handed alpha
Helix 8
AA8
A
192 195Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5T09.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 141first strand
Strand 2
A
77 86parallel
Strand 3
A
184 190parallel
Strand 4
A
49 54parallel
Strand 5
A
209 214parallel
Strand 6
A
232 235parallel
Strand 7
A
222 223anti-parallel
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