Analysis of interatomic Contacts of Structural Units in PDB entry:
5T12


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T12 entry

There is 1 chain in PDB entry 5T12 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 170GLU 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5T12. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
204 231Right-handed alpha
Helix 2
AA2
A
236 250Right-handed alpha
Helix 3
AA3
A
251 264Right-handed alpha
Helix 4
AA4
A
267 285Right-handed alpha
Helix 5
AA5
A
288 293Right-handed alpha
Helix 6
AA6
A
294 310Right-handed alpha
Helix 7
AA7
A
331 336Right-handed alpha
Helix 8
AA8
A
355 365Right-handed alpha
Helix 9
AA9
A
375 380Right-handed alpha
Helix 10
AB1
A
396 411Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5T12.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
392 395anti-parallel
Strand 3
A
383 387anti-parallel
Strand 4
A
180 187anti-parallel
Strand 5
A
323 327parallel
Strand 6
A
343 348parallel
Strand 7
A
368 370parallel
Strand 8
A
174 177anti-parallel
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