Analysis of interatomic Contacts of Structural Units in PDB entry:
5T1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T1H entry

There are 2 chains in PDB entry 5T1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ALA 332
B
 SER 2ALA 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5T1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 24Right-handed 310
Helix 2
AA2
A
25 29Right-handed 310
Helix 3
AA3
A
35 37Right-handed 310
Helix 4
AA4
A
74 89Right-handed alpha
Helix 5
AA5
A
120 125Right-handed alpha
Helix 6
AA6
A
126 128Right-handed 310
Helix 7
AA7
A
129 150Right-handed alpha
Helix 8
AA8
A
158 160Right-handed 310
Helix 9
AA9
A
194 198Right-handed 310
Helix 10
AB1
A
199 204Right-handed alpha
Helix 11
AB2
A
211 228Right-handed alpha
Helix 12
AB3
A
237 250Right-handed alpha
Helix 13
AB4
A
250 261Right-handed alpha
Helix 14
AB5
A
266 268Right-handed 310
Helix 15
AB6
A
269 274Right-handed alpha
Helix 16
AB7
A
280 285Right-handed 310
Helix 17
AB8
A
294 305Right-handed alpha
Helix 18
AB9
A
308 312Right-handed 310
Helix 19
AC1
A
314 320Right-handed alpha
Helix 20
AC2
A
321 323Right-handed 310
Helix 21
AC3
A
324 331Right-handed alpha
Helix 22
AC4
B
20 24Right-handed 310
Helix 23
AC5
B
25 29Right-handed 310
Helix 24
AC6
B
35 37Right-handed 310
Helix 25
AC7
B
74 89Right-handed alpha
Helix 26
AC8
B
120 125Right-handed alpha
Helix 27
AC9
B
126 128Right-handed 310
Helix 28
AD1
B
129 150Right-handed alpha
Helix 29
AD2
B
158 160Right-handed 310
Helix 30
AD3
B
166 169Right-handed 310
Helix 31
AD4
B
194 198Right-handed 310
Helix 32
AD5
B
199 204Right-handed alpha
Helix 33
AD6
B
211 228Right-handed alpha
Helix 34
AD7
B
237 250Right-handed alpha
Helix 35
AD8
B
250 261Right-handed alpha
Helix 36
AD9
B
266 272Right-handed 310
Helix 37
AE1
B
280 285Right-handed 310
Helix 38
AE2
B
289 293Right-handed 310
Helix 39
AE3
B
294 305Right-handed alpha
Helix 40
AE4
B
308 312Right-handed 310
Helix 41
AE5
B
314 320Right-handed alpha
Helix 42
AE6
B
321 323Right-handed 310
Helix 43
AE7
B
324 332Right-handed alpha
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There are 6 sheets in PDB entry 5T1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 47first strand
Strand 2
A
51 58anti-parallel
Strand 3
A
64 70anti-parallel
Strand 4
A
109 114anti-parallel
Strand 5
A
97 102anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
180 181anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 165first strand
Strand 2
A
170 173anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 47first strand
Strand 2
B
51 58anti-parallel
Strand 3
B
64 70anti-parallel
Strand 4
B
109 114anti-parallel
Strand 5
B
97 102anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
180 181anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 165first strand
Strand 2
B
170 173anti-parallel
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