Analysis of interatomic Contacts of Structural Units in PDB entry:
5T2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T2V entry

There is 1 chain in PDB entry 5T2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2VAL 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5T2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
38 50Right-handed alpha
Helix 3
AA3
A
62 73Right-handed alpha
Helix 4
AA4
A
95 107Right-handed alpha
Helix 5
AA5
A
107 125Right-handed alpha
Helix 6
AA6
A
134 138Right-handed 310
Helix 7
AA7
A
144 166Right-handed alpha
Helix 8
AA8
A
184 189Right-handed 310
Helix 9
AA9
A
194 199Right-handed alpha
Helix 10
AB1
A
207 220Right-handed alpha
Helix 11
AB2
A
221 224Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5T2V.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 57first strand
Strand 2
A
31 36parallel
Strand 3
A
7 10parallel
Strand 4
A
78 81parallel
Strand 5
A
127 132parallel
Strand 6
A
170 177parallel
Strand 7
A
230 233parallel
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