Analysis of interatomic Contacts of Structural Units in PDB entry:
5T57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T57 entry

There is 1 chain in PDB entry 5T57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5T57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 23Right-handed alpha
Helix 2
AA2
A
35 47Right-handed alpha
Helix 3
AA3
A
52 58Right-handed alpha
Helix 4
AA4
A
68 70Right-handed 310
Helix 5
AA5
A
71 80Right-handed alpha
Helix 6
AA6
A
81 83Right-handed 310
Helix 7
AA7
A
94 99Right-handed alpha
Helix 8
AA8
A
126 131Right-handed alpha
Helix 9
AA9
A
152 166Right-handed alpha
Helix 10
AB1
A
176 184Right-handed alpha
Helix 11
AB2
A
191 209Right-handed alpha
Helix 12
AB3
A
212 232Right-handed alpha
Helix 13
AB4
A
240 255Right-handed alpha
Helix 14
AB5
A
258 263Right-handed 310
Helix 15
AB6
A
264 274Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5T57.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
4 8parallel
Strand 3
A
62 65parallel
Strand 4
A
88 91parallel
Strand 5
A
109 117parallel
Strand 6
A
141 149anti-parallel
Strand 7
A
169 174parallel
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