Analysis of interatomic Contacts of Structural Units in PDB entry:
5T5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T5X entry

There is 1 chain in PDB entry 5T5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3LEU 491
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5T5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 26Right-handed alpha
Helix 2
AA2
A
48 68Right-handed alpha
Helix 3
AA3
A
79 92Right-handed alpha
Helix 4
AA4
A
103 120Right-handed alpha
Helix 5
AA5
A
134 142Right-handed alpha
Helix 6
AA6
A
149 159Right-handed alpha
Helix 7
AA7
A
185 191Right-handed alpha
Helix 8
AA8
A
213 230Right-handed alpha
Helix 9
AA9
A
240 245Right-handed 310
Helix 10
AB1
A
251 257Right-handed alpha
Helix 11
AB2
A
261 278Right-handed alpha
Helix 12
AB3
A
283 286Right-handed 310
Helix 13
AB4
A
287 301Right-handed alpha
Helix 14
AB5
A
323 333Right-handed alpha
Helix 15
AB6
A
337 351Right-handed alpha
Helix 16
AB7
A
354 366Right-handed alpha
Helix 17
AB8
A
373 385Right-handed alpha
Helix 18
AB9
A
389 401Right-handed alpha
Helix 19
AC1
A
416 423Right-handed alpha
Helix 20
AC2
A
426 433Right-handed alpha
Helix 21
AC3
A
434 437Right-handed 310
Helix 22
AC4
A
446 450Right-handed 310
Helix 23
AC5
A
451 458Right-handed alpha
Helix 24
AC6
A
472 488Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5T5X.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 77first strand
Strand 2
A
30 37parallel
Strand 3
A
4 9parallel
Strand 4
A
93 99parallel
Strand 5
A
123 127parallel
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