Analysis of interatomic Contacts of Structural Units in PDB entry:
5T66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T66 entry

There are 2 chains in PDB entry 5T66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 30LEU 291
B
 THR 30LEU 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5T66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 45Right-handed alpha
Helix 2
AA2
A
72 74Right-handed 310
Helix 3
AA3
A
75 88Right-handed alpha
Helix 4
AA4
A
92 95Right-handed 310
Helix 5
AA5
A
101 105Right-handed 310
Helix 6
AA6
A
111 116Right-handed 310
Helix 7
AA7
A
122 133Right-handed alpha
Helix 8
AA8
A
134 145Right-handed alpha
Helix 9
AA9
A
147 158Right-handed alpha
Helix 10
AB1
A
170 174Right-handed 310
Helix 11
AB2
A
185 198Right-handed alpha
Helix 12
AB3
A
203 216Right-handed alpha
Helix 13
AB4
A
223 228Right-handed 310
Helix 14
AB5
A
276 289Right-handed alpha
Helix 15
AB6
B
31 45Right-handed alpha
Helix 16
AB7
B
72 74Right-handed 310
Helix 17
AB8
B
75 88Right-handed alpha
Helix 18
AB9
B
92 95Right-handed 310
Helix 19
AC1
B
101 105Right-handed 310
Helix 20
AC2
B
111 116Right-handed 310
Helix 21
AC3
B
122 133Right-handed alpha
Helix 22
AC4
B
134 145Right-handed alpha
Helix 23
AC5
B
147 158Right-handed alpha
Helix 24
AC6
B
170 174Right-handed 310
Helix 25
AC7
B
185 198Right-handed alpha
Helix 26
AC8
B
203 216Right-handed alpha
Helix 27
AC9
B
223 228Right-handed 310
Helix 28
AD1
B
276 289Right-handed alpha
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There are 6 sheets in PDB entry 5T66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 63first strand
Strand 2
A
47 54anti-parallel
Strand 3
A
260 267anti-parallel
Strand 4
A
246 253anti-parallel
Strand 5
A
233 240anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
183 184anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
118 121anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 63first strand
Strand 2
B
47 54anti-parallel
Strand 3
B
260 267anti-parallel
Strand 4
B
245 253anti-parallel
Strand 5
B
233 241anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
183 184anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
118 121anti-parallel
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