Analysis of interatomic Contacts of Structural Units in PDB entry:
5T67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T67 entry

There are 2 chains in PDB entry 5T67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 10LEU 414
B
 PRO 10LEU 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 5T67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 41Right-handed 310
Helix 2
AA2
A
67 72Right-handed alpha
Helix 3
AA3
A
83 101Right-handed alpha
Helix 4
AA4
A
119 126Right-handed alpha
Helix 5
AA5
A
136 146Right-handed alpha
Helix 6
AA6
A
156 168Right-handed alpha
Helix 7
AA7
A
178 182Right-handed 310
Helix 8
AA8
A
184 195Right-handed alpha
Helix 9
AA9
A
208 216Right-handed alpha
Helix 10
AB1
A
217 221Right-handed 310
Helix 11
AB2
A
230 241Right-handed alpha
Helix 12
AB3
A
252 255Right-handed 310
Helix 13
AB4
A
271 285Right-handed alpha
Helix 14
AB5
A
288 316Right-handed alpha
Helix 15
AB6
A
326 337Right-handed alpha
Helix 16
AB7
A
350 354Right-handed 310
Helix 17
AB8
A
369 373Right-handed 310
Helix 18
AB9
A
383 385Right-handed 310
Helix 19
AC1
A
386 394Right-handed alpha
Helix 20
AC2
A
394 400Right-handed alpha
Helix 21
AC3
B
79 82Right-handed 310
Helix 22
AC4
B
83 101Right-handed alpha
Helix 23
AC5
B
117 126Right-handed alpha
Helix 24
AC6
B
136 146Right-handed alpha
Helix 25
AC7
B
156 168Right-handed alpha
Helix 26
AC8
B
178 182Right-handed 310
Helix 27
AC9
B
184 195Right-handed alpha
Helix 28
AD1
B
208 216Right-handed alpha
Helix 29
AD2
B
217 221Right-handed 310
Helix 30
AD3
B
230 241Right-handed alpha
Helix 31
AD4
B
252 255Right-handed 310
Helix 32
AD5
B
271 285Right-handed alpha
Helix 33
AD6
B
288 316Right-handed alpha
Helix 34
AD7
B
328 337Right-handed alpha
Helix 35
AD8
B
350 354Right-handed 310
Helix 36
AD9
B
367 373Right-handed 310
Helix 37
AE1
B
383 385Right-handed 310
Helix 38
AE2
B
386 394Right-handed alpha
Helix 39
AE3
B
394 400Right-handed alpha
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There are 6 sheets in PDB entry 5T67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 30first strand
Strand 2
A
46 54anti-parallel
Strand 3
A
60 62anti-parallel
Strand 4
A
227 228anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
129 133parallel
Strand 3
A
108 112parallel
Strand 4
A
170 176parallel
Strand 5
A
196 207parallel
Strand 6
A
257 264anti-parallel
Strand 7
A
243 251anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 367first strand
Strand 2
A
346 348parallel
Strand 3
A
320 323parallel
Strand 4
A
378 381parallel
Strand 5
A
403 406parallel
Strand 6
A
412 414anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 29first strand
Strand 2
B
47 54anti-parallel
Strand 3
B
60 62anti-parallel
Strand 4
B
227 228anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 151first strand
Strand 2
B
129 133parallel
Strand 3
B
108 112parallel
Strand 4
B
170 176parallel
Strand 5
B
196 207parallel
Strand 6
B
257 264anti-parallel
Strand 7
B
243 251anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 366first strand
Strand 2
B
346 347parallel
Strand 3
B
320 323parallel
Strand 4
B
378 381parallel
Strand 5
B
403 406parallel
Strand 6
B
412 414anti-parallel
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