Analysis of interatomic Contacts of Structural Units in PDB entry:
5T73

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5T73 entry

There are 8 chains in PDB entry 5T73 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	SER 150
A	THR 152	LYS 336
B	ALA 2	SER 150
B	THR 152	LYS 336
C	ALA 2	SER 150
C	THR 152	LYS 336
D	ALA 2	SER 150
D	THR 152	TRP 313

There are 49 helices in PDB entry 5T73. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	22	Right-handed alpha
Helix 2	AA2	A	37	47	Right-handed alpha
Helix 3	AA3	A	79	83	Right-handed 310
Helix 4	AA4	A	102	113	Right-handed alpha
Helix 5	AA5	A	135	139	Right-handed 310
Helix 6	AA6	A	150	167	Right-handed alpha
Helix 7	AA7	A	201	205	Right-handed 310
Helix 8	AA8	A	212	220	Right-handed 310
Helix 9	AA9	A	221	225	Right-handed 310
Helix 10	AB1	A	255	265	Right-handed alpha
Helix 11	AB2	A	279	283	Right-handed 310
Helix 12	AB3	A	295	297	Right-handed 310
Helix 13	AB4	A	317	332	Right-handed alpha
Helix 14	AB5	B	11	23	Right-handed alpha
Helix 15	AB6	B	37	47	Right-handed alpha
Helix 16	AB7	B	79	83	Right-handed 310
Helix 17	AB8	B	102	112	Right-handed alpha
Helix 18	AB9	B	135	139	Right-handed 310
Helix 19	AC1	B	150	167	Right-handed alpha
Helix 20	AC2	B	212	217	Right-handed alpha
Helix 21	AC3	B	218	220	Right-handed 310
Helix 22	AC4	B	221	225	Right-handed 310
Helix 23	AC5	B	255	265	Right-handed alpha
Helix 24	AC6	B	279	284	Right-handed 310
Helix 25	AC7	B	317	334	Right-handed alpha
Helix 26	AC8	C	11	23	Right-handed alpha
Helix 27	AC9	C	37	47	Right-handed alpha
Helix 28	AD1	C	79	83	Right-handed 310
Helix 29	AD2	C	102	112	Right-handed alpha
Helix 30	AD3	C	135	139	Right-handed 310
Helix 31	AD4	C	150	168	Right-handed alpha
Helix 32	AD5	C	216	220	Right-handed 310
Helix 33	AD6	C	221	225	Right-handed 310
Helix 34	AD7	C	255	266	Right-handed alpha
Helix 35	AD8	C	279	284	Right-handed 310
Helix 36	AD9	C	295	297	Right-handed 310
Helix 37	AE1	C	317	333	Right-handed alpha
Helix 38	AE2	D	11	22	Right-handed alpha
Helix 39	AE3	D	37	47	Right-handed alpha
Helix 40	AE4	D	79	83	Right-handed 310
Helix 41	AE5	D	102	112	Right-handed alpha
Helix 42	AE6	D	135	139	Right-handed 310
Helix 43	AE7	D	150	167	Right-handed alpha
Helix 44	AE8	D	201	205	Right-handed 310
Helix 45	AE9	D	216	220	Right-handed 310
Helix 46	AF1	D	221	225	Right-handed 310
Helix 47	AF2	D	255	266	Right-handed alpha
Helix 48	AF3	D	279	284	Right-handed 310
Helix 49	AF4	D	317	333	Right-handed alpha

There are 10 sheets in PDB entry 5T73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	61	first strand
Strand 2	A	64	67	anti-parallel
Strand 3	A	70	75	anti-parallel
Strand 4	A	27	33	parallel
Strand 5	A	3	8	parallel
Strand 6	A	92	95	parallel
Strand 7	A	116	119	parallel
Strand 8	A	145	147	parallel
Strand 9	A	128	129	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	210	first strand
Strand 2	A	228	235	anti-parallel
Strand 3	A	169	179	parallel
Strand 4	A	241	249	anti-parallel
Strand 5	A	305	314	anti-parallel
Strand 6	A	290	293	anti-parallel
Strand 7	A	271	274	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	210	first strand
Strand 2	A	228	235	anti-parallel
Strand 3	A	169	179	parallel
Strand 4	A	241	249	anti-parallel
Strand 5	A	305	314	anti-parallel
Strand 6	A	298	302	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	61	first strand
Strand 2	B	64	67	anti-parallel
Strand 3	B	70	75	anti-parallel
Strand 4	B	27	33	parallel
Strand 5	B	3	8	parallel
Strand 6	B	92	95	parallel
Strand 7	B	116	119	parallel
Strand 8	B	145	147	parallel
Strand 9	B	128	129	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	210	first strand
Strand 2	B	228	235	anti-parallel
Strand 3	B	169	179	parallel
Strand 4	B	241	249	anti-parallel
Strand 5	B	305	314	anti-parallel
Strand 6	B	290	302	anti-parallel
Strand 7	B	271	274	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	61	first strand
Strand 2	C	64	67	anti-parallel
Strand 3	C	71	75	anti-parallel
Strand 4	C	27	33	parallel
Strand 5	C	3	8	parallel
Strand 6	C	92	95	parallel
Strand 7	C	116	119	parallel
Strand 8	C	145	147	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	210	first strand
Strand 2	C	228	235	anti-parallel
Strand 3	C	169	179	parallel
Strand 4	C	241	249	anti-parallel
Strand 5	C	305	314	anti-parallel
Strand 6	C	290	293	anti-parallel
Strand 7	C	271	274	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	210	first strand
Strand 2	C	228	235	anti-parallel
Strand 3	C	169	179	parallel
Strand 4	C	241	249	anti-parallel
Strand 5	C	305	314	anti-parallel
Strand 6	C	298	302	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	61	first strand
Strand 2	D	64	67	anti-parallel
Strand 3	D	70	75	anti-parallel
Strand 4	D	27	33	parallel
Strand 5	D	3	8	parallel
Strand 6	D	92	95	parallel
Strand 7	D	116	119	parallel
Strand 8	D	145	147	parallel
Strand 9	D	128	129	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	210	first strand
Strand 2	D	228	235	anti-parallel
Strand 3	D	169	179	parallel
Strand 4	D	241	249	anti-parallel
Strand 5	D	305	314	anti-parallel
Strand 6	D	290	302	anti-parallel
Strand 7	D	271	274	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5T73

Analysis of interatomic Contacts of Structural Units in PDB entry:
5T73