Analysis of interatomic Contacts of Structural Units in PDB entry:
5T7A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5T7A entry

There are 2 chains in PDB entry 5T7A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 928ARG 1020
B
 GLY 929ARG 1020
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5T7A

There are 6 sheets in PDB entry 5T7A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
930 934first strand
Strand 2
A
937 942anti-parallel
Strand 3
A
948 955anti-parallel
Strand 4
A
984 990anti-parallel
Strand 5
A
979 981anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
974 977first strand
Strand 2
A
962 968anti-parallel
Strand 3
A
997 1005anti-parallel
Strand 4
A
1010 1012anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
974 977first strand
Strand 2
A
962 968anti-parallel
Strand 3
A
997 1005anti-parallel
Strand 4
A
1016 1019anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
931 934first strand
Strand 2
B
937 942anti-parallel
Strand 3
B
948 955anti-parallel
Strand 4
B
984 990anti-parallel
Strand 5
B
979 981anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
974 977first strand
Strand 2
B
962 968anti-parallel
Strand 3
B
997 1005anti-parallel
Strand 4
B
1010 1012anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
974 977first strand
Strand 2
B
962 968anti-parallel
Strand 3
B
997 1005anti-parallel
Strand 4
B
1016 1019anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il